Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2907 ATGGAAGACAAAGACAGAGCACCTCCCGATCCTGCAACCGCCGGAGAGTTTATCGGCAACTCGAGCTGGTCTCTCGGCGTCGATGATTCCGATGGCACTCATTTCTTCTCTGGCGATAGAGATAGAACCATGTTCGGTGACATCGGCTGGAATCTTGTACCGGACCAAGTCGGAGCCAGCGAGGGATCGTTGCCGCCGGTTCAAACCGGTTCGATCGAACCAGCTCCGACGTCGTCTTACAGGTCTAATAATCAATCCATTTCTTCAAGCTCTAGTGAGGATCCGCCGGAGAAATCTACCGTCTCTGACGAAAAACCGCCGGAAATACCTAGTAAAAGTAAAAAGAAAGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTCGAGGATGGCTACAGATGGCGAAAGTATGGTCAGAAGGCAGTTAAAAATAGCCCATTTCCTAGAAGCTATTATAGATGCACAAATAGTAAATGCACGGTGAAGAAAAGGGTTGAACGCTCTTGTGAAGACCCAACTATTGTTGTAACAACTTATGAAGGCCAACACTGTCATCACACAGTTGGATATCCTCGAGGCGGAATCATTAGTCACGAAGCTTCCTTTACTGGCCATTTTTCTCCAACAATGCCTCAATTCTATTATCCTATTCAAATACCTACAGAATCAAACACTTGCACCACTCCTGTTTCTCAGCATAGCCAATCACTTGATGATCATGAAGCTGGAAGATCTAGCAGCGCTACAATGGCTGTGTCTGATGCATCGCTGCCGCAGCATCCAACTGATGAAGGGCTACTTGGAGATATTGTACCCCGTGGAATGCGCAGCAGGGATGAGAGAAATATTTGA 879 0.471 MEDKDRAPPDPATAGEFIGNSSWSLGVDDSDGTHFFSGDRDRTMFGDIGWNLVPDQVGASEGSLPPVQTGSIEPAPTSSYRSNNQSISSSSSEDPPEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSCEDPTIVVTTYEGQHCHHTVGYPRGGIISHEASFTGHFSPTMPQFYYPIQIPTESNTCTTPVSQHSQSLDDHEAGRSSSATMAVSDASLPQHPTDEGLLGDIVPRGMRSRDERNI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2907 292 Pfam WRKY DNA -binding domain 138 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2907 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 209 IPR044810 GO:0003700
Psa2g2907 292 ProSiteProfiles WRKY domain profile. 132 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2907 292 MobiDBLite consensus disorder prediction 97 114 - -
Psa2g2907 292 MobiDBLite consensus disorder prediction 234 265 - -
Psa2g2907 292 MobiDBLite consensus disorder prediction 234 292 - -
Psa2g2907 292 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 13 209 - -
Psa2g2907 292 MobiDBLite consensus disorder prediction 56 125 - -
Psa2g2907 292 Gene3D WRKY domain 124 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g2907 292 SMART WRKY_cls 137 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2907 292 SUPERFAMILY WRKY DNA-binding domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g2907 292 MobiDBLite consensus disorder prediction 1 27 - -
Psa2g2907 292 MobiDBLite consensus disorder prediction 62 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2907 Psa-Chr2 335666076 335671610 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g2907 WRKY 1.6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2907 2 335666076 335671610 Psa2g2907 2 335666076 335671610 ECH