Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2694 ATGTCTGAGATGATTAATGATTCAACCATCAAACTTTTTGGGAGAACAATATTCTTAACACACAACATCGATGTCTCTACCAATGATTCTTCCTCAGAATTTGAACCTTCTCTTCCTCATGAAGACTTCTCTAATCATAGTCTTCATTCATCTGTATCTTCATCTTCTCCACTTGAAGTAAATTCTTCAATGGAACATGTAGCAAAGAAATATAAGGAAACATCAAGGAAAGAGTTCACCTCAGACCAAGATTTAGATGATGAGGGTTCATTTCACCCCGCAAAGGATTTAAAATCCACCACATCTTCAAGTCTTATTGAGAACCCCAAGACTCCCCCATCAGAAACAGAAACTTCGCAACTGAATTCTACTAAAATTGATGAACAAAGTGATATTTCACAAGACAAATCTCCGATGAAACCCGACAAAATTGTTCCATGTCCAAGGTGCAAAAGCATGGACACAAAGTTTTGCTACTACAACAACTACAACATCAAACAACCGCGACACTTTTGCAAAAACTGTCAGAGATATTGGACTTCTGGAGGAACCACTAGAAAGATGCTTGTAGGCGCAGGTCGGCGCAAGAACAAAATCTCTTCTTTTTCTTCTGATGTATCACATTTTCAACAAATGAATACTGTCTTTACCTTTGGATCAAATTCTCCTATTATGTCTTCAACTCCACTTGACAAGAAAATGAATATTGATTCACATGAAGAAACAATTGATAAGAGTTATCAAAGTTTTCCTCCACAGATTCCATGGAACCCTGCAATGTGTTATCCTGTGTCATTTTATCCAAATATGGTACACTATGGCGGTTTCTTGCAACCATTATGGAATGTACAATCTATCCCAACACAATCTTGTGGCCCAAGTAAACCTACATTAGGGAAACATTCAAGAGATGGAGATATGATCATTCATCCCAACTCGGAGAAAGAAAAACTTGGCTTAGAAAGTAACAAGAAAGAAGGTAATAGTAATACTAGTGTGTTGATTCCTAAGACACTCATAATTGATGATCCGAATGAAGTTGCAAAGAGTTCTGTATGGTCAACAATAGGAATCAAGAATGCGAGAGGAATTTTTAAGGGATTTGCATCAAAGGGTGATGATAAGAATGATCATGTTGTCGAAGCCTCCTCATCAGTATTGAAAGCTAACCCTGCAGCTTCATCAAGGTCTCTTGTGTTCCATGAGAGGATTTGA 1215 0.3753 MSEMINDSTIKLFGRTIFLTHNIDVSTNDSSSEFEPSLPHEDFSNHSLHSSVSSSSPLEVNSSMEHVAKKYKETSRKEFTSDQDLDDEGSFHPAKDLKSTTSSSLIENPKTPPSETETSQLNSTKIDEQSDISQDKSPMKPDKIVPCPRCKSMDTKFCYYNNYNIKQPRHFCKNCQRYWTSGGTTRKMLVGAGRRKNKISSFSSDVSHFQQMNTVFTFGSNSPIMSSTPLDKKMNIDSHEETIDKSYQSFPPQIPWNPAMCYPVSFYPNMVHYGGFLQPLWNVQSIPTQSCGPSKPTLGKHSRDGDMIIHPNSEKEKLGLESNKKEGNSNTSVLIPKTLIIDDPNEVAKSSVWSTIGIKNARGIFKGFASKGDDKNDHVVEASSSVLKANPAASSRSLVFHERI* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2694 404 MobiDBLite consensus disorder prediction 65 94 - -
Psa2g2694 404 MobiDBLite consensus disorder prediction 28 140 - -
Psa2g2694 404 ProSitePatterns Zinc finger Dof-type signature. 147 183 IPR003851 GO:0003677|GO:0006355
Psa2g2694 404 PANTHER CYCLIC DOF FACTOR 1 3 206 - -
Psa2g2694 404 PANTHER CYCLIC DOF FACTOR 1 228 403 - -
Psa2g2694 404 MobiDBLite consensus disorder prediction 43 62 - -
Psa2g2694 404 MobiDBLite consensus disorder prediction 95 128 - -
Psa2g2694 404 PANTHER CYCLIC DOF FACTOR 2 228 403 IPR045174 GO:0003700|GO:0006355
Psa2g2694 404 PANTHER CYCLIC DOF FACTOR 2 3 206 IPR045174 GO:0003700|GO:0006355
Psa2g2694 404 Pfam Dof domain, zinc finger 142 198 IPR003851 GO:0003677|GO:0006355
Psa2g2694 404 ProSiteProfiles Zinc finger Dof-type profile. 145 199 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2694 Psa-Chr2 310305443 310307533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2694 115 404 C2C2-Dof Transcription Factor Family AT5G62430 42.623 8.34e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Psa2g2694 zf-Dof 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2694 - - mtr:MTR_5g041530 515.768