Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2066 ATGACTCTCCCTTTCTTTCTCTTCTTCTCCATACTCACCACAGTTTCCACCGCTCTCCCATACGGTATCTCCTACCACATTGACTGTGGCACTCCAACAAACACCACCGATTCCTTCAACACAACCTGGCTCTCCGACCGTTTCTTCACCGGAGGAACTACCGGGATCGTCTCTGAGCCTCTCCGTTTCCACCACCACCACGAGAAGACTCTCCGCTTCTTCCCTATTTCTTCCGGTAAGAAGAACTGCTACACCGTTCCTTTACTCTCCACCTCCTCACGCTACCTCCTCCGCACCTTTGTTGTCTATGATAACTACGACGGCAAGTCTCACCCTCCCTCCTTTGACGTCTCCGTCTCTGGCACCGTCGTCTTTTCCTGGCGTTCTCCTTGGCCTGAATCCCTCGCCCGTGACGGTGCCTATGCGGACCTATTCGCTTCCTTCCAAGAACAAGCCCTAATCTGCTTCTACAGCTTCGCCACCGATCCTCCCGTCGTTTCCTCGCTTGAGCTCTTTGCCGTCGATCCCGCTTCTTACGGTTCCGCTTCCATTGCCAACAATGATACCATACTTGTTAACTATGGTCGACTCTCTTGCGGCTCCAATCAGTGGGGTCCGGGCTTCACAAACGATGCGGACAGGTTTGGAAGGTCGTGGCAATCCGATTCCGAGTATCGAACCAGAGTCGCCGGCCAGAACAAGGTAGTTGCGGTATCCACCAGGAGTAGCATTCTGGGAGCTGATCAGAAGCCCAATTACTTCCCGACGAAGCTGTACCAAACCGCAGCAACTACGGCGGAGACTGCCGAGGAGGGCGGTGGCGTGTTGGAGTACGAATTGAACGTGGATGCTAAATTGGATTACCTCGTGTGGCTGCATTTTGCTGAGATCGAGGATAGGGTGAGGAAGGCTGGAGAGAGGGTGTTTGATGTGTTCGTCAATGGCGACAATCTGACAAGACTGGATATTTACAAGCAAGCGGGAGGTTTAGCTGCGTTTACTTGGCATCACACGGTGAAAAATTTGAGTAGCAGCTCGTTGAGTGTGAAGCTTGTTGGAGTTGTGGGTGCACCTCTCATCTGTGGGATTGAGAATTATGCTTTGGTCCCTGGCGATCCTTCTACAGTTCCTCAGCAAGTGATTGCCATGAAAGCATTGAAGGATTCTCTTCGGGTTCCTGAAAGAATGGGTTGGAATGGTGATCCCTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGTATGAGTAAGGATAATACTGCTCTTGTCATAAGTCAAATAGATCTGGGCAGTCAAGGCTTGAAAGGGTTCATAAGCGACCAGATTAGTCTTTTGTCGGACTTGGTAAGCCTGAACTTGAGCTCTAATTTGTTGATGGGTGAAGTACCGTCTGGCCTTGGTCAAAAATCCCTAATACACCTGGACTTGTCCAACAATCAATTAACAGGCTCAATTCCAGATAGTATAGCTTCTTCAAGTTTGCAGCTTGTGTTATTGAATGGTAACTTATTGGAAGGGCAAGTGCCGGATGAACTCTATTCTATTGGTGTGCATGGTGGAGCCATTGACCTCTCCAGCAACAAAGGTTTGTGCGGTGTACCATCTCTGCCAGCTTGTCCTATGTTTTGGAAGAATGGAAGATTATCTACTGAGGGAAAAATTGCTATAGGCTTGTCTAGTCTTTTCGTTTTCTGTTTAATACTACTGCTGGTCTATATCTATATCAGGAGGAGAAGGAATGATTATGACTTTGCTCTGCCTCACGAATTAACAGCATTAGCCGCCAAAAGAAACCGATATCAGAGGCAAAAATCCTTGATGGTTCTTGAGATGGAGAGTCAACACGCGAAGGGACTGCCTTCACCTTCTGCCACACAATAA 1890 0.4894 MTLPFFLFFSILTTVSTALPYGISYHIDCGTPTNTTDSFNTTWLSDRFFTGGTTGIVSEPLRFHHHHEKTLRFFPISSGKKNCYTVPLLSTSSRYLLRTFVVYDNYDGKSHPPSFDVSVSGTVVFSWRSPWPESLARDGAYADLFASFQEQALICFYSFATDPPVVSSLELFAVDPASYGSASIANNDTILVNYGRLSCGSNQWGPGFTNDADRFGRSWQSDSEYRTRVAGQNKVVAVSTRSSILGADQKPNYFPTKLYQTAATTAETAEEGGGVLEYELNVDAKLDYLVWLHFAEIEDRVRKAGERVFDVFVNGDNLTRLDIYKQAGGLAAFTWHHTVKNLSSSSLSVKLVGVVGAPLICGIENYALVPGDPSTVPQQVIAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNTALVISQIDLGSQGLKGFISDQISLLSDLVSLNLSSNLLMGEVPSGLGQKSLIHLDLSNNQLTGSIPDSIASSSLQLVLLNGNLLEGQVPDELYSIGVHGGAIDLSSNKGLCGVPSLPACPMFWKNGRLSTEGKIAIGLSSLFVFCLILLLVYIYIRRRRNDYDFALPHELTALAAKRNRYQRQKSLMVLEMESQHAKGLPSPSATQ* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2066 629 SUPERFAMILY L domain-like 375 520 - -
Psa2g2066 629 Gene3D - 195 367 - -
Psa2g2066 629 ProSiteProfiles Leucine-rich repeat profile. 473 495 IPR001611 GO:0005515
Psa2g2066 629 Gene3D Ribonuclease Inhibitor 379 546 IPR032675 -
Psa2g2066 629 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 18 627 - -
Psa2g2066 629 Pfam Malectin-like domain 27 367 IPR024788 -
Psa2g2066 629 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 18 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2066 Psa-Chr2 210930160 210943503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2066 27 496 Receptor kinase-like Gene Family AT1G05700 29.184 1.87e-34 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2066 2 210930160 210943503 Psa2g2066 2 210930160 210943503 ECH