Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2043 ATGACGGACACCACTGATGACATTGCAGAGGAAATATCCTTCCAAAGCTTCGACGATGACTGTAGATTGCTCGGAAATCTTCTCAACGACGTCATGCAGCGGGAAGTTGGCAATGTCTTTGTTGAAAAACTTGAAAAAATTAGAATCCTTGCACAGAGTGCTTGTAATATGAGACAGGCAGGGATTGAGGACATGGCAGACATGTTGGAGAAGCAGTTGGCTTCTGAGTTATCCAATATGACATTGGAAGAAGCTCAAACACTTGCCCGTGCCTTCAGTCACTATCTTACATTGATGGCCACAGCAGAAACCCACCATAGGGTTCGAAAAGGCGTCAACATGGCAAATTTTGCAAAATCTTGTGATGACATCTTTCGCCAGCTGTTGCAGGATGGAATTTCCCCAGATGACCTTTATAATACAGTTTGCAAGCAGGCGGTTGAAATTGTTCTTACAGCTCATCCCACACAAATTAATCGACGTACCTTGCAATACAAACACATTAAGATTGCTCATCTTTTAGATTATAATGACCGACCTGATCTTGGCCATGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCCATATGGCAGACAGATGAACTTAGACGTCAGAAACCTACTCCAGTTGATGAAGCTAGAGCTGGATTGAATATTGTGGAGCAGTCGCTCTGGAAAGCTGTCCCTCATTATTTACGTAGAGTCAGCAATGCTTTAAAGAAGCACACGGGGAAACCACTTCCATTGACTTGCACTCCCATAAAGTTTGGGTCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTTACAAAAGATGTTTCACTTTTGTCAAGATGGATGGCAATTGACCTCTATATTCGGGAAGTAGACAGTCTGAGATTTGAGCTATCCATGAAGAGGTGCTCTGATAAGTTGTCTAGATTGGCACATGCAATTCTAGAAGATGCTAACCACGAGACTCAACGAGAGAATTGGAATCAACCAGAGAGCAGAAGTCAGTCAAAACATCCGACGGCTTCATTACTTCCATCTAAACTTCCAGCTAGAGCTCATTTACCTTCTTGTGCCGTAAATGGTGAATCTGATCAACCAAGACTCGACATCCCTGGTTCTGATTACAAACAACTCAATCACAAGGATGGTAAGACTTCAACTACAAAGGTGTGCAATGCTGAAAGTTCCGGTAGCCATTCATCCCCAACTTGTTCAGAGAGTTCCAATACTTCATCGATTTCAATTCCACGCTCTCCTTCATTCAACTCTAGTCAACAACTTCTTGCTCAAAGGAAATTATATGCAGAATCCCATATGGGAAGATCTAGTTTTCAGAAGCTTTTGGAGCCAAAGCTCCCTCATCTTCCTGGAATTGCTCCTTACAGGGTTTTCCTCGGGAATGTAAAAGATAAGCTTCAGAGAACCCGTAGGCGGTTGGAACTGCTTCTCGAGGATTGTCCATGTGAATTTGATTATTCTCAATACTATGAAACAACAGAGCAGCTTTTGGAACCTCTTCTCATCTGTTATGAATCAATGCAATCTTGTGGAGCCGGGGTGTTAGCTGATGGTCGACTTGCTGATCTGATCCGTAGAGTTGCTACCTTTGGCATTGTGTTAATGAAGCTTGACTTGCGTCAGGAATCTGGAAGACATGTTGATACACTTGATGCAATTACAAAGTATTTGGATTTGGGTACATACAGTGAATGGGATGAAGAAAAAAAATTGGACTTTTTAACAAGAGAACTTAAAGGGAAGAGGCCACTAGTTCCTCCTAGTATAGAGGTTGCTCCAGATGTTAAAGAAGTCCTAGATACTTTTCGAATTGCTGCCGAGCTAGGGAGTGATTCACTTGGAGCCTATGTGATCTCTATGGCCTCTAATGCAAGTGACGTCCTTACAGTAGAGCTCTTACAAAAGGATGCACGTCTTACAGTTAGTGGGGAATTAGGAAAAGCATGTCCAGGTGGAACGCTTCGGGTGGTTCCTCTATTTGAAACTGTCAAGGACCTAAGAGGAGCTGGTTCAGTTATCAGGAAACTTTTATCAATAGATTGGTACCGCCAGCACATTATTAAAAACCATAACGGACACCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGCTTTACTGCTGCTTGGGAACTTTACAAAGCTCAAGAGGATGTAGTGGCTGCTTGCAATGAGTACGGTATTAAGGTTACACTGTTTCATGGCCGCGGAGGGAGTATTGGTCGTGGTGGAGGCCCAACATATATGGCTATTCAGTCCCAGCCACCTGGCTCTGTGATGGGAACACTTCGGTCAACTGAACAGGGAGAGATGGTGCAGGCCAAGTTTGGGTTGCCACAGACAGCTGTTAGACAACTTGAAATATACACAACAGCTGTGCTACTTGCTACCCTTCGTCCACCTCTCCCACCCCGAGAAGAAAAATGGCGTAATCTGATGGAAGACATATCACAAATCAGTTGCCAGAGTTACCGCAGTGTAGTCTATGAAAACCCAGAGTTCTTGACCTACTTCAACGAGGCCACTCCTCAAGCAGAGCTTGGGTTCCTGAATATAGGTAGCCGCCCCACGAGGAGAAAGGCCACTACAGGAATTGGACACCTTCGTGCCATTCCGTGGATATTTGCATGGACACAAACCAGATTTGTTCTTCCTGCTTGGCTTGGAGTTGGAGCAGGTTTGAAAGGTGCTTGTGAGAAAGGACTAACAGAAGAGCTAAAAGTGATGTACAAAGAGTGGCATTTCTTTCAAAGCATAATAGACCTGATTGAGATGGTTTTGGGAAAAGCAGATATTTCTATTGCTAAGCACTATGATGAAGTTCTTGTGTCAGAGAAGAGACAAGAACTTGGTCGTCAACTAAGGAACGAGCTCATTACAACTGGGAAGTTTGTGACAGTTATTAGTGGGCATGACAAACTTCTGCAGAATAACAGAACATTGAAGAGGTTGATTGAAAATAGACTTCCTTTTCTTAATCCCATGAACATGTTGCAGGTTGAGATACTTAAAAGGTTAAGACGTGATGCTGATAACCTTAAAGCAAGAGATGTTCTCCTTATCACCATTAATGGTATTGCTGCAGGGATGAGGAACACTGGTTAA 3159 0.4337 MTDTTDDIAEEISFQSFDDDCRLLGNLLNDVMQREVGNVFVEKLEKIRILAQSACNMRQAGIEDMADMLEKQLASELSNMTLEEAQTLARAFSHYLTLMATAETHHRVRKGVNMANFAKSCDDIFRQLLQDGISPDDLYNTVCKQAVEIVLTAHPTQINRRTLQYKHIKIAHLLDYNDRPDLGHEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMKRCSDKLSRLAHAILEDANHETQRENWNQPESRSQSKHPTASLLPSKLPARAHLPSCAVNGESDQPRLDIPGSDYKQLNHKDGKTSTTKVCNAESSGSHSSPTCSESSNTSSISIPRSPSFNSSQQLLAQRKLYAESHMGRSSFQKLLEPKLPHLPGIAPYRVFLGNVKDKLQRTRRRLELLLEDCPCEFDYSQYYETTEQLLEPLLICYESMQSCGAGVLADGRLADLIRRVATFGIVLMKLDLRQESGRHVDTLDAITKYLDLGTYSEWDEEKKLDFLTRELKGKRPLVPPSIEVAPDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLTVELLQKDARLTVSGELGKACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNLMEDISQISCQSYRSVVYENPEFLTYFNEATPQAELGFLNIGSRPTRRKATTGIGHLRAIPWIFAWTQTRFVLPAWLGVGAGLKGACEKGLTEELKVMYKEWHFFQSIIDLIEMVLGKADISIAKHYDEVLVSEKRQELGRQLRNELITTGKFVTVISGHDKLLQNNRTLKRLIENRLPFLNPMNMLQVEILKRLRRDADNLKARDVLLITINGIAAGMRNTG* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2043 1052 Gene3D Phosphoenolpyruvate/pyruvate domain 427 546 - -
Psa2g2043 1052 Pfam Phosphoenolpyruvate carboxylase 19 335 IPR021135 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 Pfam Phosphoenolpyruvate carboxylase 460 1052 IPR021135 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Psa2g2043 1052 MobiDBLite consensus disorder prediction 392 429 - -
Psa2g2043 1052 MobiDBLite consensus disorder prediction 329 355 - -
Psa2g2043 1052 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 Coils Coil 473 493 - -
Psa2g2043 1052 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1052 IPR015813 GO:0003824
Psa2g2043 1052 MobiDBLite consensus disorder prediction 336 350 - -
Psa2g2043 1052 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1052 IPR022805 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 1052 - -
Psa2g2043 1052 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 1052 IPR021135 GO:0006099|GO:0008964|GO:0015977
Psa2g2043 1052 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 710 722 IPR033129 -
Psa2g2043 1052 MobiDBLite consensus disorder prediction 385 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2043 Psa-Chr2 201162152 201188753 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2043 2 201162152 201188753 Psa2g2043 2 201162152 201188753 ECH