Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2040 ATGAGGAGGAAGTTACATCTGAGCAAGATCTATTCCTTCGCATGTGGGAGACCATCTTTTAAAAGAGAACATTCACATATTGGAGAGCGTGGATATTCACGCCATGTGTTTTGCAATCAACCACACACTTTTGAGTATGCAGATAATTCAGTGAGCTCAACAAAGTATACTCTTGCCACATTTTTGCCCAAGTCACTCTTTGAACAGTTTAGGAGAGTCGCTAATTTCTATTTTTTGGTAACTGGTACTTTGGCCTTTACAAACCTTGCCCCCTATACTGCTGCCAGTGCTATTCTTCCTTTGATTATTGTTATTGGTGCTACTATGGTTAAAGAGGGTATTGAAGATTGGCGACGCAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTGCATAAAGGTCATGGAACTTTTGAATATACTGAGTGGAAGAATCTCAAGGTGGGGCATATTGTAAAGATAATAAAAGATGAATTCTTCCCTGCAGACCTAGTACTTGTTTCGTCAAGTTATGATGATGCAGTATGTTATGTCGAGACAATGAATTTGGACGGCGAGACAAATTTGAAGTTAAAACAAGGATTAGAAGTCACTTGTGCTTTACACCAAGATTTTGACTTGTCTGATTTTAGAGCTTCAATCAAATGTGAAGATCCAAATGCAAATTTATATTCATTTGTTGGGACCATGGAGTTTAACGATCAACAATATCCCCTATCTTCTCACCAACTTCTTCTCAGAGACTCTAAACTTCGTAATACAGACTACATCTTTGGCGTCGTCGTCTTCACTGGTCACGACACTAAGCTCATTCAAAACTCCACCCATCCACCTTCAAAAAGAAGCAGAGTTGAGAAGAAGATGGATAAGATTATCTACTTATTATTTTGCATTTTATTTTTTATGGCAGCTCTTGGATCTGTTTTCTTTGGAATTACAACTAAAGATGATTTGAGCCAACAAGGTGTGATGAAAAGATGGTATCTAAGACCAGACCATTCTACAATTTTCTTTGATCCTAAAAGAGCTTCTGCCGCTGCTATGTTTCATTTTTTGACAGCCTTAATGTTATACAGTTTCTTCATTCCAATCTCATTGTATGTATCAATAGAAATTGTCAAGGTTCTTCAAAGCATCTTCATCAATCAAGATATACATATGTACTACGCCGAAGCAGATACACATGCCTATGCCCGTACTTCAAACTTGAATGAGGAACTTGGACAAGTTGATACAATACTTTCTGATAAAACCGGAACTCTCACTTGCAACTCAATGGAGTTTATAAAATGTTCCATTGCTGGGGTAGCTTACGGACGTGGTGTTACAGAGGTCGAGAGGGCCATGAATAGAAGAAATGATTCTCCTTTGATTAATGACATCACGGATTCTCCCATTACAAATGAACCCTTACCCATCAAAGGTTTTAACTTTACAGATGAAAGGATAACCAATGGAACCTGGGTTAATGAGCCTAATGCAGATATTATCCACAAGTTTTTTCGCTTGTTGGCAATCTGTCATACAGCTATACCAGAAGTGGATGAAGATGCAGGAAATGTCTCGTATGAGGCCGAATCTCCTGACGAAGCAGCATTTGTGGTTGCAGCCAGAGAGATTGGTTTTGAATTCTATAAAAGGACTCAAACTAGTTTATCCATGTATGAATTGGATCCTGTTTCTGGTGACAAGGTCGAAAGGATTTTCACACTTCTGAATGTGTTAGAATTTAATAGCACGAGGAAGCGAATGTCAGTGATAGTGAAGGACGAAGAAGGGAGAATTTTGCTGCTGTGTAAAGGTGCAGACAGTGTCATGTTTGAAAGACTTGCCAAGGATGGTAGGGAATATGAAGAGAAAACCTTGGAAGATGTGCATGAATATGCTGACGCAGGTCTAAGGACACTGATATTGGCTTACCGTGAACTTGACGAAGAGAAATACCAGGAGTTTGATACTGAATTTTCTCAAGCAAAAATTTCAGTTAGTGCAGATCGGGAAACATTGATAGATGAGATAACAGATATGATTGAGAGTGATCTAATCCTTCTTGGTGCCACTGCTGTAGAAGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAACTTGCACAAGCTGGAATTAAGATATGGGTTCTAACTGGTGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTTCTTAGACAAGGAATGAAGCAGCTTATAATTCAGTTGGAGAGTCCAGACATTCAAGCATTGGAGAAGGCTGGAGACAAGAGGGCCATTGCAAAAGCTTCAAGGGAAAATATCCGGCATCAGATATCTGATGGTGCTCAACAGCTTGCCGCCTCTAGAGGAACCACTGAGCAAGCATTTGCTTTAATTATTGATGGAAAATCACTTGCTTACGCTTTAGAGGATAATATGAAGGACATGTTTCTAGATCTTGCAATTCATTGTGCATCTGTTATCTGCTGCCGGTCATCGCCAAAGCAGAAAGCACTAGTTACTAGACTGGTAAAATCTGGAACCGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCTGATATAGGGGTTGGAATCAGTGGAGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATCGCACAGTTCCGTTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACAGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAACATCACATTTGGCTTTACTCTATTCTTGTATGAAGTGTGTACATCGTTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCAGTGGTTGCCCTTGGAGTCTTTGACCAGGATGTATCTGCTCGGTACTGTCTAAGATTTCCTATATTGTATCAAGAAGGTGTGCAAAATGTCCTGTTTAACTGGAGGAGGATACTAAGTTGGATGCTTAATGGATTTATGAGTGCCATAATAATATTCTTCTTCTGCACAAACGCCATGGAGATTCAGGCCTTTGATAAGGAAGGAAGAACTGCTGGGAGGGATATACTCGGAGCAACTATGTATACATGTGTGGTATGGGTTGTGAATTTGCAGATGGCACTTGCCATAAGTTACTTCACATTGATTCAACATGTTTTCATATGGGGAACCATTGCTCTATGGTACCTTTTTCTATTGGTTTACGGTGCACTGCCTCCTGGAATTTCCACTATTTCTTATAAACTTTTCCTTGAAACTCTTGCACCATCTCCTTCTTATTGGATTCTCACATTGTTTGTGGTCATCACAACACTCATACCATACTTGTCTTACTCAGCAATCAAGATCCAGTTCTTTCCTTTTTATCATGAGATAGTACAATGGATAAGGTATGAGGGGAAGACAAATGATCCCGAATTCTGCCATATGGTGCGCCAGAGATCCTTGCGCCCAACCACGGTTGGTTCAACAGCACGCTTAGCAGCTAAGACTAACAGCATTACAGAGAGTTCTACTAACCAAAGATGA 3555 0.3961 MRRKLHLSKIYSFACGRPSFKREHSHIGERGYSRHVFCNQPHTFEYADNSVSSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTNLAPYTAASAILPLIIVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHKGHGTFEYTEWKNLKVGHIVKIIKDEFFPADLVLVSSSYDDAVCYVETMNLDGETNLKLKQGLEVTCALHQDFDLSDFRASIKCEDPNANLYSFVGTMEFNDQQYPLSSHQLLLRDSKLRNTDYIFGVVVFTGHDTKLIQNSTHPPSKRSRVEKKMDKIIYLLFCILFFMAALGSVFFGITTKDDLSQQGVMKRWYLRPDHSTIFFDPKRASAAAMFHFLTALMLYSFFIPISLYVSIEIVKVLQSIFINQDIHMYYAEADTHAYARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRRNDSPLINDITDSPITNEPLPIKGFNFTDERITNGTWVNEPNADIIHKFFRLLAICHTAIPEVDEDAGNVSYEAESPDEAAFVVAAREIGFEFYKRTQTSLSMYELDPVSGDKVERIFTLLNVLEFNSTRKRMSVIVKDEEGRILLLCKGADSVMFERLAKDGREYEEKTLEDVHEYADAGLRTLILAYRELDEEKYQEFDTEFSQAKISVSADRETLIDEITDMIESDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSFLRQGMKQLIIQLESPDIQALEKAGDKRAIAKASRENIRHQISDGAQQLAASRGTTEQAFALIIDGKSLAYALEDNMKDMFLDLAIHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVCTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLRFPILYQEGVQNVLFNWRRILSWMLNGFMSAIIIFFFCTNAMEIQAFDKEGRTAGRDILGATMYTCVVWVVNLQMALAISYFTLIQHVFIWGTIALWYLFLLVYGALPPGISTISYKLFLETLAPSPSYWILTLFVVITTLIPYLSYSAIKIQFFPFYHEIVQWIRYEGKTNDPEFCHMVRQRSLRPTTVGSTARLAAKTNSITESSTNQR* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2040 1184 Pfam Phospholipid-translocating ATPase N-terminal 37 95 IPR032631 -
Psa2g2040 1184 SFLD Haloacid Dehalogenase 398 902 - -
Psa2g2040 1184 Gene3D - 107 277 - -
Psa2g2040 1184 Pfam Cation transport ATPase (P-type) 523 612 - -
Psa2g2040 1184 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 1177 - -
Psa2g2040 1184 SUPERFAMILY HAD-like 404 895 IPR036412 -
Psa2g2040 1184 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 46 1136 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa2g2040 1184 CDD P-type_ATPase_APLT_Dnf-like 48 1011 - -
Psa2g2040 1184 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 2 1177 - -
Psa2g2040 1184 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1129 IPR023298 -
Psa2g2040 1184 Gene3D - 528 659 IPR023299 GO:0000166
Psa2g2040 1184 Gene3D - 682 891 IPR023214 -
Psa2g2040 1184 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 822 933 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa2g2040 1184 ProSitePatterns E1-E2 ATPases phosphorylation site. 418 424 IPR018303 -
Psa2g2040 1184 SFLD p-type atpase 398 902 IPR044492 -
Psa2g2040 1184 SUPERFAMILY Calcium ATPase, transduction domain A 132 274 IPR008250 -
Psa2g2040 1184 PRINTS P-type cation-transporting ATPase superfamily signature 416 430 - -
Psa2g2040 1184 PRINTS P-type cation-transporting ATPase superfamily signature 851 870 - -
Psa2g2040 1184 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 485 688 IPR023299 GO:0000166
Psa2g2040 1184 Pfam Phospholipid-translocating P-type ATPase C-terminal 879 1129 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2040 Psa-Chr2 200493188 200499228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2040 5 1176 Primary Pumps ATPases AT1G68710 72.855 0.0 1852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2040 2 200493188 200499228 Psa2g2040 2 200493188 200499228 ECH