Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1944 ATGGCACTACTACTACTTTCTCCTTCCATTCTACCCACAACCATCTTCACATTAATCTTCCACTTCCTCCTCCTCACTCACGCCACAAAAAACCCAGATTTCCACCCATTACTTGCATTTAAAACAGTTGCCGACACATCCAACAAACTCACCACATGGAACATCACCAAAGACCTATGCACATGGTACGGTGTTTCTTGTCTCAGAAACCGTGTCTCCCGCCTCGTCCTCGAAAACCTCGACCTCAACGGTTCCATCCAACCTTTAACCTCTCTCACTCAGCTCCGTGTCCTTAGCCTTAAACGCAACCATTTTAACGGTCCCATTCCAAATCTCTCCAACCTCACTTCATTAAGACTTCTCTTCCTCTCTTACAACAACTTCTCCGGCGAGTTCCCCTCCACCTTAACTTCTCTAACCCGCCTCTACCGTCTTGATCTCTCTCACAACAAACTCTCCGGCGAGTTCCCAGTGAATGTCAACAATTTGTCTCGCCTCCTCACTCTCCGCCTCAACGAAAACCAAATCCATGGACACATTCCTAACATAGACCTCTCTTACATCCAAGACTTCAATGTATCAGGTAATAGTCTCTCCGGTCGAATACCCGATTATCTTGCTGGTTTTCCAGATTCTTCCTTCACGCAAAACCCGTCTCTCTGCGGCACACCATTGCAAAAATGTAAAAACCTACCTGCCCTCGCTTCCTCGTTGGTTCCATCTTCTTCAAGTTCAATACCAGGAAACAAGACTCATAGAAATGGAGGTCCAAGAATGGGGACTTTAGTCTTAATCGCCATCATCCTTGGCGATGTATCTGTACTCGCCATTGTTTCATTGCTTCTCTACTGCTACTTCTGGCGCAACCACTCTAACAAGATGAAGGAAAGAAAAGAAAGAGAGTCAAATTCGAAGAGTTTAGAGGGTGAGAATCAAAAGATAGTTTATGTTGGGCAACAAGGGTTGGAGAAAGGTAATAAAATGGTGTTTTTCGAAGGAGCTAAGAGGTTTGAGCTAGAAGATTTGCTTCGTGCTTCAGCGGAAATGTTGGGGAAGGGTACGCTTGGCACTGTCTATAAAGCAGTTCTTGATGATGGAAGTGTTGTTGCTGTGAAGAGGTTGAAGGAGGTTCATAGTGGAGGGAAGAAAGAGTTCGAGCAGCGAATGGAAGTTATTGGAAAGTTAAGACACACTAACATTGTTAGCTTGAAGGCTTATTATTTTGCAAGGGATGAAAAATTGCTTGTCTTTGATTACATGGTTAAAGGTAGCTTGTTTTGGCTCCTTCATGGTAACCGAGGACCCGGGCGAACCCCACTGGACTGGACCACAAGGATAAAAATAGCAGCTGGAGCGGCACAAGGGGTGGCATTCATTCACAACCATAACAATAATAATAATCTAACCCACGGTAACATCAAATCCACCAACATCCTCGTTGACGTGTCTGGAACCGCACACGTGGTTGATTTTGGACTCTCCATTTTCACCCTCCCATCAACCAGAAGATCCAACGGTTACCGTGCTCCAGAAGCATTAGACGGTCGAAAACAGTCTCAGAAATCAGACGTGTATGCCTTCGGCGTTCTTTTAATGGAGATACTAACAGGGAAGTGTCCCTCCGCTGCGGACGGCGGAGCAGAGGTGGAGTTGCTAAAGTGGGTCCAGTCTGTGGTGAGGGAGGAATGGACGGCTGAGGTTTTTGATCTTGAGCTGATGAGGTATAAGGATGCTGAGGAGGAGATGGTGGCGTTGCTTCAGATTGCTTTGACGTGTACTGCGGTTGCACCAGATCAACGGCCCAAGATGAGCCACGTGGTCAAGAAGATTGAGGAGTTGCGTGGGGTCGGTGTGTCTCCGTGTCATGACACGTTGGACTCTGTTTCTGAGTCACTTTCTGTGTCTGAAGATGCATGTGGTGGGGTACTCACTAAATTTTAG 1941 0.4647 MALLLLSPSILPTTIFTLIFHFLLLTHATKNPDFHPLLAFKTVADTSNKLTTWNITKDLCTWYGVSCLRNRVSRLVLENLDLNGSIQPLTSLTQLRVLSLKRNHFNGPIPNLSNLTSLRLLFLSYNNFSGEFPSTLTSLTRLYRLDLSHNKLSGEFPVNVNNLSRLLTLRLNENQIHGHIPNIDLSYIQDFNVSGNSLSGRIPDYLAGFPDSSFTQNPSLCGTPLQKCKNLPALASSLVPSSSSSIPGNKTHRNGGPRMGTLVLIAIILGDVSVLAIVSLLLYCYFWRNHSNKMKERKERESNSKSLEGENQKIVYVGQQGLEKGNKMVFFEGAKRFELEDLLRASAEMLGKGTLGTVYKAVLDDGSVVAVKRLKEVHSGGKKEFEQRMEVIGKLRHTNIVSLKAYYFARDEKLLVFDYMVKGSLFWLLHGNRGPGRTPLDWTTRIKIAAGAAQGVAFIHNHNNNNNLTHGNIKSTNILVDVSGTAHVVDFGLSIFTLPSTRRSNGYRAPEALDGRKQSQKSDVYAFGVLLMEILTGKCPSAADGGAEVELLKWVQSVVREEWTAEVFDLELMRYKDAEEEMVALLQIALTCTAVAPDQRPKMSHVVKKIEELRGVGVSPCHDTLDSVSESLSVSEDACGGVLTKF* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1944 646 PANTHER - 25 629 - -
Psa2g1944 646 Gene3D Phosphorylase Kinase; domain 1 314 419 - -
Psa2g1944 646 SUPERFAMILY L domain-like 49 220 - -
Psa2g1944 646 Gene3D Ribonuclease Inhibitor 26 87 IPR032675 -
Psa2g1944 646 ProSiteProfiles Protein kinase domain profile. 344 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1944 646 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1944 646 Gene3D Transferase(Phosphotransferase) domain 1 420 620 - -
Psa2g1944 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 629 - -
Psa2g1944 646 Gene3D Ribonuclease Inhibitor 88 232 IPR032675 -
Psa2g1944 646 SUPERFAMILY Protein kinase-like (PK-like) 348 609 IPR011009 -
Psa2g1944 646 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1944 Psa-Chr2 182149672 182153030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1944 33 645 Receptor kinase-like Gene Family AT1G68400 62.137 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa2g1944 Pkinase 1.1e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1944 2 182149672 182153030 Psa2g1944 2 182149672 182153030 ECH