Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1872 ATGCTTAAAGCAATTTTGGCATTGGATTCTTGTGTTCTGGATATTGATCAGGTTGAGAACCTCATCAAGTTCTGTCCTACAAAGGAAGAGATGGAGGTGCTGAAGAACTATACCGGGAACAAGGATATGCTTGGAAAGTCCCGAGGATCAGCAGTAGGATTCAAATTGGACAGTCTTCTCAAGTTATCTGATACCTGTGCAAGAAATAAAAAAATGACTTTAGTACATTATGTGTGTAAGCTTCTTGCTGAGAAAAATGCCAGAACTGATAGAATCTTCTCAATTTGGTTTTCTTCTAAGATCCAACTAGAAGCATTAGCTGAAAAGATGCAAGTTGTGCATAAAGGTTCAGAGAAGGTTGAGCAAGAACTTACTGCTTCTGAAAACGATGGTTCTATATCTTCAGGATTTTGCAAGGTGTTGAAGAATTTTCTTGATTTTGCCGAAGCTGATGTGAAGTCACTTACAACATTGTATAACAGCAAACACAGTGCCAATAACACACTTAACCCGTGTTCATAA 522 0.3812 MLKAILALDSCVLDIDQVENLIKFCPTKEEMEVLKNYTGNKDMLGKSRGSAVGFKLDSLLKLSDTCARNKKMTLVHYVCKLLAEKNARTDRIFSIWFSSKIQLEALAEKMQVVHKGSEKVEQELTASENDGSISSGFCKVLKNFLDFAEADVKSLTTLYNSKHSANNTLNPCS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1872 173 Gene3D - 1 46 - -
Psa2g1872 173 Gene3D Formin, FH2 domain 47 169 IPR042201 -
Psa2g1872 173 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 161 - -
Psa2g1872 173 Pfam Formin Homology 2 Domain 45 161 IPR015425 -
Psa2g1872 173 Pfam Formin Homology 2 Domain 2 46 IPR015425 -
Psa2g1872 173 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 173 IPR015425 -
Psa2g1872 173 PANTHER FORMIN-J 45 162 - -
Psa2g1872 173 PANTHER FORMIN-J 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1872 Psa-Chr2 164837244 164837866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1872 1 46 FH2 protein (formin) Gene Family AT1G31810 82.609 2.45e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1872 - - var:108335629 212.616