Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3671 ATGGCATCACCTATGATCTCAAATTCAACAACCTCAACAACAACCGACCGATCACACAGAATAAAGAAAAAGAAGAAAGTCCTATCAAATACCCAACAACAAGCCCAAGAACAAGAACAAAGACACGCCAAATGGAGATCACAGGCTCAACAACAAATCTACTCTTCCAAACTACACCAAGCTTTAGCCAGAGTCAACCTCTCCGGAACCGGACCTCGCCGCGGAAAAGCCGTACGGGAAGCCGCCGATAGAGTTCTCGCCGTCGCGGCCAAAGGAAAAACACGGTGGAGCCGGGCCATCCTCACAAACAGACTCAAACTCAAGTTCAGGAAACAGAAGAGACATCATCAACAGAGAACCGTCGGTCCATCCCGGTCTAAGAAAGCCCGGTTCGGTGTTTTGCGTCTCAAGGGAAAAACCCTCCCAGCGGTTCAGAGAAAAGTTAAAGTCCTGGGCCGGTTGGTTCCTGGTTGTAGGAAAGAACCTTTACCGGTTATTCTTAAAGAAGTTATTGATTACATACCGGCTCTTGAGATGCAAGTCCGAGCCATGTCAGCTCTAGCTGATTTCCTCTCCGGCGCTTCTTCTTCAGCGGCTGCCTCCTCCGGTTCCTCCTTCCCGCCGCCGAGTTAA 633 0.4992 MASPMISNSTTSTTTDRSHRIKKKKKVLSNTQQQAQEQEQRHAKWRSQAQQQIYSSKLHQALARVNLSGTGPRRGKAVREAADRVLAVAAKGKTRWSRAILTNRLKLKFRKQKRHHQQRTVGPSRSKKARFGVLRLKGKTLPAVQRKVKVLGRLVPGCRKEPLPVILKEVIDYIPALEMQVRAMSALADFLSGASSSAAASSGSSFPPPS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3671 210 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 19 206 - -
Psa1g3671 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 193 IPR036638 GO:0046983
Psa1g3671 210 MobiDBLite consensus disorder prediction 1 15 - -
Psa1g3671 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 19 206 IPR044660 GO:0006355
Psa1g3671 210 MobiDBLite consensus disorder prediction 1 49 - -
Psa1g3671 210 Coils Coil 21 48 - -
Psa1g3671 210 CDD bHLH_AtIBH1_like 133 188 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3671 Psa-Chr1 309700594 309702574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3671 42 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.973 1.63e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3671 - - gmx:100792237 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3671 1 309700594 309702574 Psa1g3671 1 309700594 309702574 ECH