Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0902 ATGTTCACTTCAAGGAAGAAAATCAGCAAAGATAAGGGTGCTGAGCCAACTGAATTTGAAGAATCAGTTGGACAGGCTTTGTTCGATTTGGAGAATACCAACCATGAACTCAAAAGTGAGCTAAAGGATTTATATATCAATTCAGCCGTCCAAGTTGATGTGTCTGGCAATCGCAAGGCTGTGCTTATCAATGTCCCCTACAGACTGAGGAAGGGTTTCCGAAAGATTCATGTCAGGCTTGTTCGGGAGCTTGAGAAGAAATTCAGTGGCAAGGATGTAATCCTGATTGCCACAAGGAGGATTGTAAGGCCACCGAAGAAGGGTTCAGCTGCTCAGCGCCCCCGCAGCCGCACACTCACTGCTGTGCACGAGGCAATGTTGGAGGATGTTGTATTACCAGCTGAGATTGTTGGAAAGCGTATCAGATACCGTGTTGATGGGTCAAAGGTCATGAAGGTGTTTTTGGACCCAAAGGAGAGAAACAATACAGAATACAAGTTGGAGACCTTCGCTGCAGTTTATAGGAAACTTTCAGGCAAAGATGTTGTTTTTGAATATCCTATTACTGAGGCTTAG 576 0.4479 MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKAVLINVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRIRYRVDGSKVMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0902 191 Coils Coil 27 47 - -
Psa1g0902 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Psa1g0902 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Psa1g0902 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Psa1g0902 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0902 Psa-Chr1 60360146 60362620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0902 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 80.105 5.54e-116 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0902 K02993 - gmx:100527642 352.443