Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0322 ATGGCTTCAGCTACAGCACCCACAACTCTCTCCCTCCTCCCCACCGCAAAATCCTCCACCTCATCAGCAACCCCATCTTCCTCCCGTGTCCACCTCTCCTCCTCATTCCTTGGCGCCCGTCCGCTCCGCCGACTAGGTTTCTCGGCTGCCGATCCCTTGCTGGCATTGCAGGTGGCGTCCAAGGTGAGGACAGTGAGCGGGAAAGGAGTGAGAGGTGTAGTGTCCATGGCGAAGAAGAGTGTGGGGGATTTGAGTGCGGCGGATTTGGAAGGAAAGAAGGTTTTCGTCAGGGCTGACTTGAATGTTCCTCTTGATGATAATCAGAATATTACTGATGATACTAGGATCCGTGCTGCTGTACCAACTATCAAATATCTTATTAAGAATGGCGCTAAAGTCATCCTTTCCAGTCACTTGGGACGGCCAAAGGGTGTCACTCCCAAATACAGCTTGGCACCTCTTGTTCCCCGGCTATCCGAACTCATCGGAATCGAGGTTGTTAAGGCCGATGACAGTATTGGTCCAGAAGTAGAAAAGTTGGTGGCTTCCCTTCCAAACGGAGGAGTTCTTCTTCTAGAAAATGTAAGGTTTTACAAGGAGGAAGAGAAGAACGATCCTGAGCATGCAAAAAAGCTCGCCGCACTAGCAGATCTGTATGTGAATGATGCTTTTGGTACTGCTCATAGGGCACATGCATCAACAGAGGGAGTCACTAAATACTTGAAGCCATCTGTTGCTGGTTTTCTCTTGCAAAAGGAACTTGACTACCTTGTTGGGGCAGTATCAACCCCCAAAAGGCCATTTGCTGCAATTGTGGGTGGTTCCAAGGTCTCATCTAAAATTGGTGTGATTGAGTCACTTCTAGAAAAAGTTGACATACTTCTTCTCGGTGGAGGGATGATCTTCACATTTTACAAGGCACAAGGTCTCTCAGTTGGTTCATCCCTTGTAGAGGAAGATAAGTTGGATCTTGCTACAACACTACTTGCAAAAGCCAAGGCAAAGGGGGTGTCACTCTTGTTACCGAGTGATGTCGTGATTGCAGACAAATTTGCTCCTGATGCAAACAGCCAGATTGTGCCAGCATCTGCCATTCCCGATGGTTGGATGGGATTGGATATTGGTCCAGATTCTATTAAAACATTCAACGAAGCATTGGACACCACCAAAACCATCATATGGAATGGACCAATGGGAGTGTTCGAGTTTGACAAGTTTGCTACTGGGACAGAGGCTATTGCAAAGAAGTTGGCTGACCTCAGTGGAAAAGGGGTGACAACTATTATTGGAGGAGGAGATTCCGTCGCTGCTGTGGAGAAAGTAGGAGTCGCTGAAGTCATGAGCCACATATCCACTGGTGGTGGTGCAAGTTTGGAGTTATTGGAAGGCAAAGAGCTTCCAGGTGTCCTTGCTCTCGACGAAGCCACACCAGTTGCTGTGTAA 1443 0.4823 MASATAPTTLSLLPTAKSSTSSATPSSSRVHLSSSFLGARPLRRLGFSAADPLLALQVASKVRTVSGKGVRGVVSMAKKSVGDLSAADLEGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKYLIKNGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELIGIEVVKADDSIGPEVEKLVASLPNGGVLLLENVRFYKEEEKNDPEHAKKLAALADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSTPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATTLLAKAKAKGVSLLLPSDVVIADKFAPDANSQIVPASAIPDGWMGLDIGPDSIKTFNEALDTTKTIIWNGPMGVFEFDKFATGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVAEVMSHISTGGGASLELLEGKELPGVLALDEATPVAV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0322 480 Pfam Phosphoglycerate kinase 86 464 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 Hamap Phosphoglycerate kinase [pgk]. 83 474 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 SUPERFAMILY Phosphoglycerate kinase 83 474 IPR036043 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 88 104 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 110 132 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 187 202 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 215 237 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 246 268 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 269 288 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 391 416 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 427 438 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PRINTS Phosphoglycerate kinase family signature 450 467 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 Gene3D - 42 147 IPR015824 GO:0004618|GO:0006096
Psa1g0322 480 Gene3D - 149 475 IPR015824 GO:0004618|GO:0006096
Psa1g0322 480 CDD Phosphoglycerate_kinase 87 474 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PIRSF Pgk 74 480 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 ProSitePatterns Phosphoglycerate kinase signature. 93 103 IPR015911 GO:0004618|GO:0006096
Psa1g0322 480 Gene3D - 263 450 IPR015824 GO:0004618|GO:0006096
Psa1g0322 480 PANTHER PHOSPHOGLYCERATE KINASE 1 475 IPR001576 GO:0004618|GO:0006096
Psa1g0322 480 PANTHER PHOSPHOGLYCERATE KINASE 1 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0322 Psa-Chr1 17669317 17673173 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0322 1 17669317 17673173 Psa1g0322 1 17669317 17673173 ECH