Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0274 ATGGCTGAACAAAAATCACAAGAAACACATACAGTCACATTAAAAACATGTGATGATGTTCTTTTTGAGGTTGAAATCAATGTTGTGAAAGAGATGAAAACTATACAATCATTCATGGATGATTCAGAAGACATTGCAACAATTCCTCTAGCCAATGTGACCAGTCAGCATCTTGCTATGATCATTGAGTACTGCAAGAAACACGTCTCAGAAGAAGAGAACGAAGATGCAAAAGACAAGTTTGATGTTGAATTCACCAAGAAATTGAGCGGCGAGGACATGAAACTTCTCATCGTTGCTGCAAATTATCTAAACATAAAGAGCCTTCTTGATTTGCTAGCTCGTACCCTTGCGGATCATATTAAGAACAAGAGTGTGGAGTTTGTGCGTGAATTCTTCAATGTCGAAAACGATTTCGAGCCTGAGGAAGAAGCCAAACTCCGTCAAGAGGCTCCATGGGCTTTTGAAAATTTAGATGAAAATTAA 486 0.3827 MAEQKSQETHTVTLKTCDDVLFEVEINVVKEMKTIQSFMDDSEDIATIPLANVTSQHLAMIIEYCKKHVSEEENEDAKDKFDVEFTKKLSGEDMKLLIVAANYLNIKSLLDLLARTLADHIKNKSVEFVREFFNVENDFEPEEEAKLRQEAPWAFENLDEN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0274 161 PANTHER SKP1 10 157 IPR016897 GO:0006511
Psa1g0274 161 SUPERFAMILY Skp1 dimerisation domain-like 79 153 IPR036296 GO:0006511
Psa1g0274 161 PIRSF SCF_Skp 1 157 IPR016897 GO:0006511
Psa1g0274 161 Pfam Skp1 family, tetramerisation domain 11 69 IPR016073 GO:0006511
Psa1g0274 161 Gene3D Potassium Channel Kv1.1; Chain A 8 156 IPR011333 -
Psa1g0274 161 SUPERFAMILY POZ domain 11 71 IPR011333 -
Psa1g0274 161 SMART skp1_3 9 106 IPR001232 GO:0006511
Psa1g0274 161 Pfam Skp1 family, dimerisation domain 107 154 IPR016072 GO:0006511
Psa1g0274 161 PANTHER SCF UBIQUITIN LIGASE, SKP1 COMPONENT 10 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0274 Psa-Chr1 14850737 14851424 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0274 1 14850737 14851424 Psa1g0274 1 14850737 14851424 ECH