Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0273 ATGGGATGTAAGTTTGGGTTAAATGGGAACCAGAGACCTGATGCTACATTTGGTTTACCTCAACAAGCTGGAACGGAATGTGTTCTACGGTCAATGGAATCTGCACACTACTATCCAGAGAACAATCTTGCCATGGCACGACGGAAGGGATATAACATTGTAATGGCAACTAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCCTGGGCCGAGTATAACATCATGGCACCGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACATCGAGTAGAGAGAAGGAAGAAAAAAAGCCCGGCCCTCAAGAAACGCCCTTGCAAGTGCACTCGAGGGTCAGAAACTGTATATCATATCTATGTGAGAGAAAGGGGGAGATTTGAGATGAAGTCCATTTACTTGAGATCCGGCAATTTAACTTTGGAGGCCTTAAAGTCTGCTGTTCTTGCGAAATTCACATCCCTGAATCATGTTCCTGTATGGAAGTCTGAAAGACCGGAAGTTCTAAAAGGTGGCGATGAATTAAAGATTTACCGAATACACCCTGCGGGTTTGACACAAAGGCAGGCTCTTTATACGTTCGCGTTCGATGGGGATGTTGATTTCAGGGGTCACTTGGAAAACAATCCTTGTACCAATTTTAGGCCAGCTCATTGGGGATTTACATGCAGAAAATATATGACTTCTTCCACTGAACAATATGTGAATTTACAGAATATATATCAGGCTAAGGCTGAGGCTGACATCCTTGCAATAGAAAGAGTGGCGAGAAATACTTTGAAGAAGATTGGTCGAGATCCAAACAGCATTCCAAGGACAACAGTTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGATATCGCCTGATTGAAGATGAGTTTAATTCTCCAAACCTACCGGAGTTACAGAAGTACTTAACAGACGAGGATTACAGCATTGCTATGGGAATTTATATTTTGCTTCGGGCTGTTGACCGGTTTGCTGCTAACTACAACAGTTTTCCTGGACAGTTGACAGTGCAATGGACAGGAATATATCTCCCCCAAGTGGAACCTTTGTAA 1077 0.4262 MGCKFGLNGNQRPDATFGLPQQAGTECVLRSMESAHYYPENNLAMARRKGYNIVMATSLSSDVPVGYFSWAEYNIMAPLYIHLAAFAFTWPHRVERRKKKSPALKKRPCKCTRGSETVYHIYVRERGRFEMKSIYLRSGNLTLEALKSAVLAKFTSLNHVPVWKSERPEVLKGGDELKIYRIHPAGLTQRQALYTFAFDGDVDFRGHLENNPCTNFRPAHWGFTCRKYMTSSTEQYVNLQNIYQAKAEADILAIERVARNTLKKIGRDPNSIPRTTVKSFCKNARKLKVCRYRLIEDEFNSPNLPELQKYLTDEDYSIAMGIYILLRAVDRFAANYNSFPGQLTVQWTGIYLPQVEPL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0273 358 Gene3D - 265 350 - -
Psa1g0273 358 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 226 346 IPR035985 GO:0008641
Psa1g0273 358 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 1 79 - -
Psa1g0273 358 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 95 199 - -
Psa1g0273 358 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 95 199 IPR001503 GO:0006486|GO:0008417|GO:0016020
Psa1g0273 358 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 1 79 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0273 Psa-Chr1 14834118 14835755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0273 1 79 Xyloglucan Fucosyltransferase1 AT3G19280 68.354 2.95e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0273 - - gmx:100793799 208.764