Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0152 ATGGCTACAACTACAGCAATAATTATCTTCACTGTCATAATACTTGCTTTGACATGGTCATGGAGGATTCTGAATTGGTTATGGCTGAAGCCAAAGAAGCTAGAAAAGATTCTAAGAGAACAGGGACTTCAAGGAAATTCATATAGGTTTTTAGTTGGAGACGTAAAAGATATTGTAAAGACGCGAAAAGAAGCAACATCTAAACCCATTAATCTTTCTGATGATATCGTTCCTCGGGTGTTTCCCTATTTCCAACAAAGTGCTTTAAAACATGGTAAGAACTCTTTTGTTTGGTTTGGACCAACACCAAGAGTTAACATCACAGATCCTGAGCTAATTAAAGATGTATTTAACAAAAAAGATGACTTCCGAAAGCCGATTGTGAATCGGCTTGTCAAGTTACTAGTTAATGGTTTAGTAAACCTCGAGGGAGAACAGTGGAGCAAGCACAGAAAGATAATCAATCCTGCATTCCATTTTGAAAAACTGAAGATCATGTTACCAAATTTCTTCAAAAGTTGCGATGATCTGATTGGCAAATGGGAAACAATGCTGTCATCAGATGGATCATGTGAAATGGACGCATGGCCTTTCCTTCAAAACATGGCCAGTGATGTTATTTCTAGAACGGCATTTGGAAGAAACAACCAATATTTATGTTTTCTACCAACTCCGACCCATAGGAGGATGAAGCAAATTGACAGAGATGTAAAGGCTTCACTTACAAATATGATTAACAAGAGGGAGAAAGCACTAAAGGCAGGCGAAGCAACTCACGATGACTTGTTAAGTATACTTTTAGAGTCAAATCACAAGGAAATGGAAGAACATGGCAACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACCACTTCGGTTTTGCTTGTATGGACAATGGTGTTGTTGAGTAGGTACCCTGATTGGCAAGCACGCGCGCGGGAGGAAGTATTACAAGTTTTCGGTAACAATAAACCAGATTTTGATGGGCTAAGTCATCTTAAGATTGTCACTATGATTTTGAACGAGGTTCTTCGGTTATACCCTCCAGTAGTCGCGCTTCCTCGAACTGTTCACAAAGATATGGAACTTGGAAACCTAAAATTACCTGCTGGTGTGCAGCTTTTCTTATCGATAGTTTTGGTTCACCATGACACAGAACTATGGGGAGATGACGCTAAGGTGTTCAATCCTGAAAGATTTTCTGAAGGTGTCTTAAAAGCAACAAATGGAAGATATTCATTTTTTCCATTTGGAGGGGGTCCTAGAATTTGCATTGGACAAAACTTTTCCATGATGGAAGCAAAGATAGCAATAGCAATGATTTTGCAACATTTCTCATTTGAACTTTCTCCTACCTATACTCATGCGCCTGCTACGGTAATTACACTTCAGCCGCAATATGGTGCTCATATTATTCTCCATAAAATAGGAAGCTCATAG 1482 0.3893 MATTTAIIIFTVIILALTWSWRILNWLWLKPKKLEKILREQGLQGNSYRFLVGDVKDIVKTRKEATSKPINLSDDIVPRVFPYFQQSALKHGKNSFVWFGPTPRVNITDPELIKDVFNKKDDFRKPIVNRLVKLLVNGLVNLEGEQWSKHRKIINPAFHFEKLKIMLPNFFKSCDDLIGKWETMLSSDGSCEMDAWPFLQNMASDVISRTAFGRNNQYLCFLPTPTHRRMKQIDRDVKASLTNMINKREKALKAGEATHDDLLSILLESNHKEMEEHGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVLQVFGNNKPDFDGLSHLKIVTMILNEVLRLYPPVVALPRTVHKDMELGNLKLPAGVQLFLSIVLVHHDTELWGDDAKVFNPERFSEGVLKATNGRYSFFPFGGGPRICIGQNFSMMEAKIAIAMILQHFSFELSPTYTHAPATVITLQPQYGAHIILHKIGSS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0152 493 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Psa1g0152 493 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 486 - -
Psa1g0152 493 PANTHER CYTOCHROME 11 486 - -
Psa1g0152 493 Pfam Cytochrome P450 219 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 Pfam Cytochrome P450 83 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 SUPERFAMILY Cytochrome P450 78 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 Gene3D Cytochrome P450 26 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0152 493 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0152 Psa-Chr1 9972368 9975424 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0152 1 9972368 9975424 Psa1g0152 1 9972368 9975424 ECH