Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0119 ATGGCCGCTTCTTCTCTACTCAGATCTGCGATCGTTTCTTCACATCACTCCTCCGATCGCTTTCAGGTACTTCGCAATGCCTCAAGTATTAATTCAAAATCTACGATGTTGCAAAAGAGCATATTCGGAACTTCATTTCCATGTGATCCATTAGTCTTACAGAACAGCAATACCCGGAGCATTCAGCCTATCAGCGCTACAGCTACGGAAATCCCTCTCCCTGTACAAAAATCCAGCAGCACGGGGAAGACAAGAGTTGGAATAAATGGTTTTGGTAGAATTGGAAGGTTGGTGTTACGTGTAGCTACTTCACGGGATGATATTGATGTTGTTGCAATTAATGATCCTTTTATTGATGCTAAATATATGGCTTATATGTTCAAGTATGATTCTACTCATGGACCATTCAAGGGAACTATTAAGGTTTTGGATGACACAACTTTGGAAATTAATGGGAAGCAGGTTAAAGTTGTAAGCAAGAGAGATCCTGCGGAGATCCCTTGGGGTGATTTCGGTGCTGACTATGTCATAGAGTCTTCGGGAGTATTTACAACATTAGAGAAAGCTTCATCACATTTGAAGGCTGGTGCCAAGAAAATTATAATATCAGCTCCATCTGCTGATGCACCAATGTTTGTGGTAGGAGTGAACGAGAAGACATACAAGTCCAACATGGACATTGTTTCTAATGCAAGCTGTACAACGAATTGTCTTGCTCCTCTTGCCAAGGTGGTTCATGAGGAGTTTGGTATAATTGAGGGTTTGATGACAACTGTGCATGCAACAACAGCAACACAAAAGACTGTAGATGGTCCTTCAATGAAGGATTGGAGAGGGGGAAGAGGTGCAGCTCAAAATATAATTCCAAGTTCTACTGGTGCTGCAAAGGCTGTTGGAAAAGTTCTTCCCGAGCTAAATGGAACTCACTTGGAATGGCCTTTCGTGCACGCTTCAGAGGGACAATTGAAGGGAATTCTTGGATACACAGATGAAGATGTGTCTCTAATGACTTTGTTGGTGATTCAAGTCGCAGTTTTTTCTGTGTGTTGGGATATGTTTGTTTGCAAGTCGAGTATCTTTGATGCTAAGGCTGGGATTGGGCTTAGTAAGTCCTTTGTGAAGCTGGTCTCGTGGTATGACAATGAGTGGGGTTATAGTTTTAAATTGCACTCCACAACTATAATTGCGGATGTTGAAGTCTCAGCAACATTAAAACTACAATTTCCACAACTGCAATTTAAAACCATGCATCAACCGAGTGTTGGACCTTGTAGGGCACATGGCATTGGTGGGAGCCCACAATTGAACACCAATAGCGTCTCTTACTGTTGGTGTTGCAATTCTGATATTTCCTTTAGGTTAAAAATTAGTAGCTGCTTAGGTTCTCAGATTTTGATTTTTGATATTCATAAGATTGCAGACATATCTGATGCCCCTCCAACAGAGGAAGAAATAGATGACCATATCGTATGCATTGAGAAATAA 1485 0.4135 MAASSLLRSAIVSSHHSSDRFQVLRNASSINSKSTMLQKSIFGTSFPCDPLVLQNSNTRSIQPISATATEIPLPVQKSSSTGKTRVGINGFGRIGRLVLRVATSRDDIDVVAINDPFIDAKYMAYMFKYDSTHGPFKGTIKVLDDTTLEINGKQVKVVSKRDPAEIPWGDFGADYVIESSGVFTTLEKASSHLKAGAKKIIISAPSADAPMFVVGVNEKTYKSNMDIVSNASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGTHLEWPFVHASEGQLKGILGYTDEDVSLMTLLVIQVAVFSVCWDMFVCKSSIFDAKAGIGLSKSFVKLVSWYDNEWGYSFKLHSTTIIADVEVSATLKLQFPQLQFKTMHQPSVGPCRAHGIGGSPQLNTNSVSYCWCCNSDISFRLKISSCLGSQILIFDIHKIADISDAPPTEEEIDDHIVCIEK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0119 494 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 83 249 IPR036291 -
Psa1g0119 494 SMART gp_dh_n_7 84 233 IPR020828 GO:0051287
Psa1g0119 494 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 85 185 IPR020828 GO:0051287
Psa1g0119 494 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 238 307 IPR020829 GO:0016620
Psa1g0119 494 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 316 389 - -
Psa1g0119 494 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 1 308 - -
Psa1g0119 494 Gene3D - 86 388 - -
Psa1g0119 494 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 231 238 IPR020830 GO:0016620
Psa1g0119 494 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 192 205 IPR020831 GO:0016620
Psa1g0119 494 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 227 245 IPR020831 GO:0016620
Psa1g0119 494 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 254 270 IPR020831 GO:0016620
Psa1g0119 494 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 232 379 - -
Psa1g0119 494 Gene3D Dihydrodipicolinate Reductase; domain 2 233 381 - -
Psa1g0119 494 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 316 389 IPR020831 GO:0016620
Psa1g0119 494 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 308 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0119 Psa-Chr1 7122732 7128435 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0119 1 7122732 7128435 Psa1g0119 1 7122732 7128435 ECH