Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1394 ATGGCTGGTCGTGGAAGAAAGAGGCATAACTTAAGCAGAATCCATGCTTTCTCATGCGGGAAAGCGTCGTTTAATGGGGAGCATTCGCTGATTGGAGGACCTGGGTTTTCGAGAATAGTATATTGCAACGACCCAGAACGAGCTGAGGAGAGTCTTATCAATTATGGTGATAACTACGTCAGAACAACGAAATACACTCTGGTTTCGTTTCTTCCTAAGTCATTGTTTGAGCAATTCAGAAGAGTTGCCAATTTCTTTTTCCTCTTATGTGCAATCCTGGCCTTCTTCCCTGTCTCTCCTTACAATTCCCCTTTCAGCTCCGTTTTTCCTCTTACGTTTGTGGTTGCTCTTACAATGGCAAAAGAGATTATTGAGGATTGGAGGAGGAAGAAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATCGTGGAGGAGATTTTGAATCTACTAAATGGAGGGATCTAAAAGTTGGAGACGTGGTAAAGGTGGAGAAAGATGAATTCTTTCCAGCTGATCTCATCTTACTTTCATCAAGCTACGATGATGCAATTTGCTATGTGGAGACCACGAATCTTGATGGAGAAACAAACCTTAAACTGAAACAAGCATTGGAAGAAACTTCAAAGCTGCAAGAAGACCCTAGCTTTCAAGATTTCAAGGCCACTATCGCATGTGAAGATCCAAATGCAAATTTGTACACATTTATTGGCACTATGGAGCTGGGGGGTCAACAGTATCCTCTTACACCTCAGCAGCTACTGCTTAGGGACTCGAAGCTGAGGAACACGGATTTTATTTATGGCGTGGTAATCTTTACAGGTCATGACACAAAGGTTATGCAGAACTCAACAGAGCCTCCTTCAAAGAGAAGCAACATTGAGAGACGCATGGATAAAATTGTCTACTTCTTATTCTGTTTATTATTCGTGATTGCTTTTATTGGATCTGTTTTCTTTGGGATTTATACAAGTGAAGACCTTCAAAATGGTAAAATGACAAGATGGTACCTTAGACCAGATGAGACCACAATTTTTTATGATCCAAAGAGGGCAGCAATTGCAGCGATGTTGCATTTCTTGACTTTCCTTATGTTGTATGGTTACTTCATTCCCATTTCCCTCTACGTGTCAATAGAAATTGTGAAAGTTCTTCAGAGCTTTTTCATCAACCAAGACTTGCACATGTATTATGAGGAAGCGGACAAGCCAGCACATGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCTGATAAAACAGGAACTTTGACTTGTAATTCCATGGAATTTATCAAATGTTCCATTGCCGGGGTTACTTATGGACAAGGAGTTACAGATGTTGAGAGAGCTCTGGCAAGGAGGAAAGGGTCACCTCTAGAACAAGTGTCGATAGAAGATGACAATGTTGCAGAGATTGCTGAAGCAAAGCCACCTGTTAAAGGGTTTAACTTTCTAGATGAAAGGATCATGAGTGGGAATTGGGTCAATGAGCCTCATGCAAAAGTAATCCAAAACTTCTTAAGATCACTAGCTGTATGCCATACTGCAATACCTGAAGTCAATGAAGAAACTGGTGATGTTTCGTATGAAGCTGAATCACCAGACGAAGCAGCATTTGTGATTGCTGCCAGAGAACTTGGGTTTGAGTTCTTTGAAAGAACACAGACAACCATTTTACTGCGTGAACTCGATCCTCTATCTGGCCAGAAGGTTGAAAGATCCTATAAACTATTAAATGTATTAGAGTTTAGCAGTGCAAGAAAGCGAATGTCTGTGATTGTAAGAGATGAGGACGGGAATCTACTGCTATTTTGCAAAGGAGCTGACAGTGTCATGTTTGAAAGACTTTCAAATGATGGAAGAGAGTTTGAAGAGAAGACTCAGGAGCACATTAATGAGTATGCTGATGCTGGTCTGAGGACGTTGATACTTGCATATCGTGAACTTGATGAGGAAGAGTACAACCAATTTAATAAAGAATTCACAGAGGCCAAGAACATAGTGAGTGCTGATCGAGAGCAGATTGTAGAAGAAATAGCAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAACACGGGGTTCCGGAATGCATTGACAAGCTAGCGCAGGCTGGAATTAAGATCTGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAACATTGGATTTGCTTGTAGTTTACTAAGACAAGGAATGAAACAAATCATAATTAGCTCTGAAACTCCAGAAATCAAATCACTGGAGAAGTTGGAGGATAAGTCTGCTGCTGCTGAGGCAATTAAGGCAAGTGTTCTTCATCAGATACAGGAGGGAAAGGCATCGTTATCTACATCAGATATAAATTCTGAAGCATTAGCTCTGATAATTGATGGGAAATCTCTCACTTATGCATTAGAAGATGATGCAAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCCTCTGTCATATGCTGTCGTTCATCTCCGAAACAGAAAGCACTTGTCACAAAGCTAGTTAAGACCAAAACTGGTTGTACAACTCTAGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAGGAAGCTGACATTGGAATTGGTATCAGTGGCGTTGAAGGAATGCAGGCCGTTATGTCGAGTGACATTGCCATTGCCCAATTTTGGTTCTTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCGTCCATGATCTGTTACTTCTTCTACAAGAACATTACTTTTGGCTTCACCCTCTTCTTCTTTGAGATATATGCATCATTCTCCGGACAACCAGCTTACAACGATTGGTTTCTATCACTGTATAATGTATTCTTCACATCACTTCCAGTGATTGCCTTAGGAGTGTTTGATCAAGATGTCTCAGCAGAATTATGTCTCAAGTTTCCATTGTTATACCAAGAAGGTGTGCAAAATATCCTGTTCAGCTGGACCAGAATACTCGGCTGGCAATTCAACGGGGCAGTATGCGCTACTCTGATATTCTTCTTCTGCATCAGTGCACTGGAGACTCAAGCCTTCCGAAAAGCCGGCGAAGTTGTTGGGCTAGAAATCCTCGGCGCCACCATGTACACTTGTGTAGTGTGGGTGGTAAATTGCCAAATGGCATTATCTATCAATTACTTCACTTTTATACAGCATATTTTCATCTGGGGTAGCATTCTGTTCTGGTATATATTCCTTCTGGCTTATGGAGCCATGGATCCTACCATATCCACAACTGCATATAAGGTCTTCATTGAAGCTTGTGCTCCTGCACCTTCTTACTGGCTCGTCACTTTGCTTGTTCTTGTTACCTGCCTCATTCCATATTTCGTCTGTGCTTCCATAAAGATGCGGTTTGCCCCCTCATATAATCAAATGATACAATGGATCAGTAACGATGGCCAAGTATATGATCCAGAGTACTGTAATGTGGTCCGGTCGAGATCGATACGCCACACGACCGTAGGGTTCACGGCTCGTTTTGAAGCATCCAAACGGTTTGAAGAGAAGTCTGAGAGCATTTCTTAA 3585 0.4148 MAGRGRKRHNLSRIHAFSCGKASFNGEHSLIGGPGFSRIVYCNDPERAEESLINYGDNYVRTTKYTLVSFLPKSLFEQFRRVANFFFLLCAILAFFPVSPYNSPFSSVFPLTFVVALTMAKEIIEDWRRKKQDIEMNNRKVKVHRGGDFESTKWRDLKVGDVVKVEKDEFFPADLILLSSSYDDAICYVETTNLDGETNLKLKQALEETSKLQEDPSFQDFKATIACEDPNANLYTFIGTMELGGQQYPLTPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSNIERRMDKIVYFLFCLLFVIAFIGSVFFGIYTSEDLQNGKMTRWYLRPDETTIFYDPKRAAIAAMLHFLTFLMLYGYFIPISLYVSIEIVKVLQSFFINQDLHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVTYGQGVTDVERALARRKGSPLEQVSIEDDNVAEIAEAKPPVKGFNFLDERIMSGNWVNEPHAKVIQNFLRSLAVCHTAIPEVNEETGDVSYEAESPDEAAFVIAARELGFEFFERTQTTILLRELDPLSGQKVERSYKLLNVLEFSSARKRMSVIVRDEDGNLLLFCKGADSVMFERLSNDGREFEEKTQEHINEYADAGLRTLILAYRELDEEEYNQFNKEFTEAKNIVSADREQIVEEIAEKIEKDLILLGATAVEDKLQHGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKLEDKSAAAEAIKASVLHQIQEGKASLSTSDINSEALALIIDGKSLTYALEDDAKDLFLELAIGCASVICCRSSPKQKALVTKLVKTKTGCTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFWFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFFEIYASFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAELCLKFPLLYQEGVQNILFSWTRILGWQFNGAVCATLIFFFCISALETQAFRKAGEVVGLEILGATMYTCVVWVVNCQMALSINYFTFIQHIFIWGSILFWYIFLLAYGAMDPTISTTAYKVFIEACAPAPSYWLVTLLVLVTCLIPYFVCASIKMRFAPSYNQMIQWISNDGQVYDPEYCNVVRSRSIRHTTVGFTARFEASKRFEEKSESIS 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1394 1194 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1151 - -
Prci9g1394 1194 Gene3D - 694 902 IPR023214 -
Prci9g1394 1194 Coils Coil 117 137 - -
Prci9g1394 1194 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Prci9g1394 1194 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Prci9g1394 1194 FunFam Phospholipid-transporting ATPase 698 902 - -
Prci9g1394 1194 Gene3D - 110 286 - -
Prci9g1394 1194 SFLD Haloacid Dehalogenase 406 913 - -
Prci9g1394 1194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 700 IPR023299 GO:0000166
Prci9g1394 1194 FunFam Phospholipid-transporting ATPase 117 286 - -
Prci9g1394 1194 Gene3D - 538 673 IPR023299 GO:0000166
Prci9g1394 1194 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci9g1394 1194 SUPERFAMILY HAD-like 419 917 IPR036412 -
Prci9g1394 1194 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1139 IPR023298 -
Prci9g1394 1194 Pfam E1-E2 ATPase 136 329 - -
Prci9g1394 1194 FunFam Phospholipid-transporting ATPase 540 698 - -
Prci9g1394 1194 Pfam Phospholipid-translocating ATPase N-terminal 40 102 IPR032631 -
Prci9g1394 1194 SFLD p-type atpase 406 913 IPR044492 -
Prci9g1394 1194 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Prci9g1394 1194 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1141 IPR032630 -
Prci9g1394 1194 Pfam Cation transport ATPase (P-type) 520 625 - -
Prci9g1394 1194 NCBIfam HAD-IC family P-type ATPase 828 944 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g1394 1194 NCBIfam HAD-IC family P-type ATPase 107 206 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g1394 1194 SUPERFAMILY Calcium ATPase, transduction domain A 138 284 IPR008250 -
Prci9g1394 1194 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1394 Prci-Chr9 27307238 27313275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1394 1 1194 Primary Pumps ATPases AT1G68710 69.813 0.0 1780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1394 9 27307238 27313275 Prci9g1394 9 27307238 27313275 ECH