Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1353 ATGGGTTCTCCGTCTGAACTAAGCCTGGATTGCAAACCGCACAGCTATTCTTGGCTTCTGAAATCGTTTGGAGATCAGGCAGATCATACCTACAAGCTTGAAGAGTTCCTTTCTCGGCTCCAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTTCTTACTAACGCTATGGAGGCCTCAAGGCAGCAACTTCAGGCCTTCAGAGCAAATCAAGGCACGAGGCCAGTGCTAGAAGAATTCATACCCATCAAGCAATCAACCTCTGAAAGCTCTGAGAAAGCATCCAACGTATCAGACAAGGCAAATTGGATGACATCTGCTCAATTATGGAGCCAAGCAAATGAAGGGACCAAGCCGCAGTCCACAATCACATCCCCTAAAGAAGCTGATATTGGTTTCAGTGTGAGCCCTAAGCTGCCTCTTGACAACAAACAGAGGAATGGGGGAGCCTTTCTGCCATTCTCAAAAGAACGAAACTCATGCCAAGGTGGCTCCACATTACGGATCATCCCAGAGTTAGCCCTCTCCTCTGTTGAGAAAGAAATGGAGGACAAGAAATGCACAGAGCCAGAAAATGCAGTGTCATGCCCCAAGAGGGAAAATTCCGGTAAAGCCGGCGGAGGCAACGGTACTGGAGTGGTCACTGATCAAGGCAAAGGGGTTTCAGTTGCATCTGATCCGCAAACAACCAGCACCATCAACACCACTAACCAAGCTCAGAGGAAGGCAAGAAGATGCTGGTCACCCGACCTGCACCGCCGATTCGTAAATGCTCTTCAGATGCTAGGCGGATCTCAAGTGGCTACTCCAAAGCAGATAAGGGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACACGACGTCCAAGTCCAAGCCCACAAGCAGCCGGGTCACCAGCACCTCAGCTCGTAGTCCTAGGAGGAATCTGGGTCCCACCGGAGTACGCCGCCGCCGCCGCCCACACTGGCGCCCCGGCCATCTATAGCCCACACCCAACCTCCCACGCGCCTCCACCGCACTATTGCACCGCAACACCAGTGCACCAAGAATTCTACGCTGCAGCGGCGCCGCAGCCAGGTCCGCCGCACCACCACACGCTGCTCCACCACCACCACCTTCAGATGTACAAAACGAATTCGCACCAGGGCTCTCCGGAATCAGAGATGCGAGGAGGGGGAGAGAGGTCGGAGAGTATAGAGGACGGGAAGTCGGAGAGCAGCAGCTGGAAGGGAGAGAGCGGGGAGAACGAAGGGGAGCGGAAAGGGCTTGCGGCACTGAGAGAAGAAGGAGAAGAGAGTCATCGGAGCGAGACGACCCTGAAATTCTAG 1389 0.5342 MGSPSELSLDCKPHSYSWLLKSFGDQADHTYKLEEFLSRLQEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFRANQGTRPVLEEFIPIKQSTSESSEKASNVSDKANWMTSAQLWSQANEGTKPQSTITSPKEADIGFSVSPKLPLDNKQRNGGAFLPFSKERNSCQGGSTLRIIPELALSSVEKEMEDKKCTEPENAVSCPKRENSGKAGGGNGTGVVTDQGKGVSVASDPQTTSTINTTNQAQRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGSPAPQLVVLGGIWVPPEYAAAAAHTGAPAIYSPHPTSHAPPPHYCTATPVHQEFYAAAAPQPGPPHHHTLLHHHHLQMYKTNSHQGSPESEMRGGGERSESIEDGKSESSSWKGESGENEGERKGLAALREEGEESHRSETTLKF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1353 462 FunFam Myb family transcription factor 249 307 - -
Prci9g1353 462 MobiDBLite consensus disorder prediction 408 462 - -
Prci9g1353 462 Coils Coil 33 53 - -
Prci9g1353 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 307 IPR017930 -
Prci9g1353 462 SUPERFAMILY Homeodomain-like 248 308 IPR009057 -
Prci9g1353 462 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 430 IPR044787 GO:0003700|GO:0006355
Prci9g1353 462 MobiDBLite consensus disorder prediction 223 251 - -
Prci9g1353 462 Gene3D - 249 307 - -
Prci9g1353 462 Pfam Myb-like DNA-binding domain 252 303 IPR001005 -
Prci9g1353 462 MobiDBLite consensus disorder prediction 189 253 - -
Prci9g1353 462 MobiDBLite consensus disorder prediction 397 462 - -
Prci9g1353 462 Coils Coil 58 78 - -
Prci9g1353 462 NCBIfam myb-like DNA-binding domain, SHAQKYF class 250 305 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1353 Prci-Chr9 27050811 27053566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1353 1 462 G2-like Transcription Factor Family AT2G03500 51.033 6.87e-135 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci9g1353 Myb_DNA-binding 1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1894 4 25811975 25814843 Prci9g1353 9 27050811 27053566 CCT
Prci9g1353 9 27050811 27053566 Prci9g1353 9 27050811 27053566 ECH