Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0310 ATGTTCACTCCCTCGCAGCCCCACCCCGTAATGCGAAGCTTAACACCTTTCCCGGAGCTTTCCTTGAACATCAGTCCTCCGGATTGTGAAGCGAAAAGAGTGGAGAATTACACCAAGGGATTCGCTGCCAAAATGCCTCACAGCGATATGTGCTCCACCTCCGATTCTGGAAGCAGTGAGAGTGATTTAAGCCATGAAAATGCCTTTTCGCACCTTGGCTATCGTGAGCCTATTACTTTGAGCTTAGGTTTTAAAATAGCAGATTTGAATCCCCTTCCCCTCCCGAGAAACGCGAATCATCATTTTCGCAACCCCCAACCTCAAATCTATGTTCGAGACTTTAAACGAAACACCAGAGTCGTCTGTGGTGTGAAAAGGAGCATCAGAGCTCCTAGAATGCGATGGACTACAAGCCTCCATGCCCATTTTGTTCATGCTGTCCAGCTGCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGTTAGAGTTGATGAATGTAAAAGATTTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGAGCACTTCCAAATGTACAGGTCATGGCCTCACTGATATGGCCGGCTTAGCTGTTGTTGATGAGCATGGTGCCTCAGCTTGTGAAAGAACACATCTGTCTCTGCCGCTTCAAAAATCTCACAGCAACAAGGAATCATGGCAATCATCAACGGGGACAAGGACAAACGATAGTAGACAAAAACCAGGAACAAGCTTGACGCATTCTCAAGTGAAGGAGAAAGAAACCATGGTGGTTGGAGGGTCCTTGTCAGATTCAGATAAGACGCTTAACCTAGAATTCACCCTTGGAAGACCCAGTTGGAACACAGACCAGCCTCAATCATCAAGCGACTTAGCTCTTCTCAACTGTTAA 909 0.4664 MFTPSQPHPVMRSLTPFPELSLNISPPDCEAKRVENYTKGFAAKMPHSDMCSTSDSGSSESDLSHENAFSHLGYREPITLSLGFKIADLNPLPLPRNANHHFRNPQPQIYVRDFKRNTRVVCGVKRSIRAPRMRWTTSLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTSKCTGHGLTDMAGLAVVDEHGASACERTHLSLPLQKSHSNKESWQSSTGTRTNDSRQKPGTSLTHSQVKEKETMVVGGSLSDSDKTLNLEFTLGRPSWNTDQPQSSSDLALLNC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0310 302 Pfam Myb-like DNA-binding domain 132 183 IPR001005 -
Prci8g0310 302 Gene3D - 130 187 - -
Prci8g0310 302 FunFam Myb family transcription factor 129 187 - -
Prci8g0310 302 MobiDBLite consensus disorder prediction 218 259 - -
Prci8g0310 302 MobiDBLite consensus disorder prediction 218 257 - -
Prci8g0310 302 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 290 IPR044847 GO:0000976|GO:0006355|GO:0010158
Prci8g0310 302 SUPERFAMILY Homeodomain-like 128 185 IPR009057 -
Prci8g0310 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 184 IPR006447 GO:0003677
Prci8g0310 302 MobiDBLite consensus disorder prediction 283 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0310 Prci-Chr8 1967849 1971352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci8g0310 Myb_DNA-binding 8.5e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0292 2 2040991 2044333 Prci8g0310 8 1967849 1971352 CCT
Prci8g0310 8 1967849 1971352 Prci8g0310 8 1967849 1971352 ECH