Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0290 ATGCAGGGAAGCTTGCGAAAGGGCACTGCTAATAAAGTCGAAGGTCGAAAAGCCTCCAGTAGATATAGAATATCGGCATTGCAACAAGATATTCATGAGCTGAAAAAGAAGCTTAGACATGAGGAGAACATCCACAGAGCATTGGAGAGGGCTTTTAACAGACCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCCCCCTGCATGCTAGCTCTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTAGAAGAGCAGGTAGTACAATCCAGGCAGGACTTGTACCAGGAAGCTGTCTACTTGTCATCTTCAAAGAGAAGAATGGGGCATTCAGCTGATATAAACAATGCAAATTCAGTTGAAAGCGCAAGACAGGTCAAACTGAAGTCTTCTTCCCACACAATGAATAACGCAGCAACATCTAAAACTAGGCTTACAACATTACCAGAGGATCGGCACAGAAAGGAGAACGAATTCTGCACGAATTCTTTTAAGAGAAGCAAACATTTTTCATGTAACAACCACACAACTAGAATTCCAATCAAGAAACTTTCATCCGACAATAAGTCAGGGCAGAAGTGTTGGGACCCACATAAGAGACAGCAAGAATTAAGGGTGAAAAACAAACCAATTGCAGAAGTAGGGAATCCCAGTCGACATGAAAAACCACTGGGAGATGACAGCCCTAATATTATTTCTGAAAACATTTTGAAGTGCTTATCAACCGTCCTCATGAGAATGAGTTCAGCGAAGAATCCAAGACCTGCAGGTGACATATCATCGTTATTGGCTCAGAAAACTCACAACTGCATTGAAGGATGGGATCCTTATGGTACCTCTTGGGGATCTGGGAAGGAGGATATTGGTCCATATAATCAACTATGTGCAATTGAAGCCAGATCTTTCAATCCAAAACGAACCGCAAATTCTTTGATTTTACTGTCTAGATTAAAAATTCTTTTGAGGAAACTTGCCTCTGCCAAGTTAGAAAACCTCAACCACCAGGAGAAACTTGCATTCTGGATCAACATCTATAACTCCTGTATGATGAACGCCTTCATTGAGAATGGCATTCCTGAGAGTCCTGAGATGTTTGTTTCACTGATGCAGAAGGCAACAATAAATGTGGGCGGACACTTGCTAAGTGCAAACACTATCGAACATTTCATCCTTAGACTTCCCTACAACTGGAAATTTACGTTTCTGAAGGGAGCTAAGAATCATGAAATGACAGCAAGAAGCATATTTGGACTGGAATTGTCAGAACCTCTAGTGACATTTGCACTCTCCCGTGGAACTTGGTCCTCTCCCGCTGTGAGAATTTATACGGCGTCACAGGTTGAGGACCAGCTGGAAGTTGCAAAAAGGGAGTATTTGCAGGCAGCAATTGGTATTTCATCGTTCAAGATTGCTATCCCAAAACTGCTGGATTGGTATTTACTGGATTTTGCAGAAGACTTGGAATCATTGCTGGATTGGATCTTCCTCCAGTTACCAAGTGAACTTGGGAAAGAAGCCATCAAGTTCATTGAAAAAAGAAGAAGCCAGCCCCTCTCACAATTTGTACAGATTATACCATATGACTTCACTTTTAGATATCTTCTATGCACATGA 1626 0.4225 MQGSLRKGTANKVEGRKASSRYRISALQQDIHELKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPCMLALLAEVAVLEEEIVRLEEQVVQSRQDLYQEAVYLSSSKRRMGHSADINNANSVESARQVKLKSSSHTMNNAATSKTRLTTLPEDRHRKENEFCTNSFKRSKHFSCNNHTTRIPIKKLSSDNKSGQKCWDPHKRQQELRVKNKPIAEVGNPSRHEKPLGDDSPNIISENILKCLSTVLMRMSSAKNPRPAGDISSLLAQKTHNCIEGWDPYGTSWGSGKEDIGPYNQLCAIEARSFNPKRTANSLILLSRLKILLRKLASAKLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMFVSLMQKATINVGGHLLSANTIEHFILRLPYNWKFTFLKGAKNHEMTARSIFGLELSEPLVTFALSRGTWSSPAVRIYTASQVEDQLEVAKREYLQAAIGISSFKIAIPKLLDWYLLDFAEDLESLLDWIFLQLPSELGKEAIKFIEKRRSQPLSQFVQIIPYDFTFRYLLCT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0290 541 Pfam Protein of unknown function, DUF547 334 463 IPR006869 -
Prci8g0290 541 Pfam Leucine-zipper of ternary complex factor MIP1 23 101 IPR025757 -
Prci8g0290 541 Coils Coil 24 51 - -
Prci8g0290 541 Coils Coil 321 341 - -
Prci8g0290 541 PANTHER EXPRESSED PROTEIN 12 540 - -
Prci8g0290 541 Coils Coil 70 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0290 Prci-Chr8 1854693 1858470 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0316 2 2216132 2228480 Prci8g0290 8 1854693 1858470 CCT
Prci8g0290 8 1854693 1858470 Prci8g0290 8 1854693 1858470 ECH