Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0280 ATGGAGGGTGTCGAAGTGAAGACGCCTCTCTCGGAATCATGTTCAAAGTGGTCAGAGGAGAAGCCAAAGGCAGAACGATCTAAAGAGACTTCTGAAGATACAAATTCTTACATTGAAGCTCCAGCCAATCAACTTAGCAACGGAAAAGTGAAATCTATCACAAATTTTACAGAGACTGAATTTACATCACCACCACATGCTTTGGATGGTCAAATTGCAGGGCAAGATGAATTTTTTCCTGCGGTTAATTCAACTTCAACCTCAGATTCTATGGATGCTGTGAAAGAAAGAAGCAATCAGGAAATTGTCATTGAAAATACCGGACCAGAAGTTAAACACAATTTCTCGGATAGGCAACAAATGCTAGATGGTAGCAAAACTGCCACTTATAGTAGTGATGACCACAACCAAATTATTTCAGCTTCCTATCATGAAACACAAAATATGCAGAATGTTCACAGTGAACAAAAAAGTAATCCATCTCAAATAAGGGTCACCAGTGCTGCTGATGAAGTCTTGGGAACGATCGACAGTGAAGATCATAATGAGATTACACTACCAGCTTCCTCTTCTGAGATGAAAGGTCTTCAAAATGACCACAATGAACTAAAGTTTGGTTCTCCTCAAACACCAGCTAGTAGTTCTGATACTGAATTCTTGGAAACAGTTCAGACCGATGATCACAATGAGATTATACAATCATCTTCCCCTTTAGAAGCCAAAGATTTGCAAAATGGCAACTATGAACAAAAGAGAGATCCACCTCAAGTAAATGTTCCTACTGCCGCTACTGAAGTCTTGGGAACGATCTACAGTAAGGATCGTAATGAAAGTATACTATCATGTTCCTATTTTGAAATGAAAGATTTGCAGAATGATCACGATGAACTAAAGATTGATTCACCTGATATGCAAATTGCCAGTCCTGCTGTTGAAGTCTTGGGAATGGTCAACACTAATGATCATGATGAGATTGCAATATCAACTTCCTCCACTAGAGTAAAAGATTTGCAGGATGATCTCGACGAACTAAATATCAGTCCACCAGAAGTAGAGGTTGTGAATGCTGAAACTGATGTCTTGGGAATGATCGACACACCTACACGGGCCAAGCAGGTTGGCCATATTGATACCGCAGCTCCAATTGAATCTGTCAAAGCAGCTGTTTCCAAATTTGGAGGAATCGTGGACTGGAAGGCTCATAGAAACCAAACAGTGGAAAGACGCCAACATGTAGAACAAGAACTCCAGAAAGCACAAGAGGAGATCCCGGGGTACAGAAAACAATTTGAGGCTGCTGAACATGTAAAAATCCAAGTATTAAAGGAGTTGGATAGTACTAAAAGATCAATTGAAGAATTAAAACTAAACCTAGAGAGGGCACAAACAGAAGAGCGCCAAGCAAGACAGGACTCGGAGCTTGCGAAGCTTAGAGTCGAAGAGATGGAACAAGGTATTGCAGATGAAGCCAGCGTGGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCCAGGTTTACAGCAGCTATTTCTGAGCTTATGTTTGTGAGGGAAGAGTTGGAAGGATTGCGCAAGGAATATGCTTCCTTAGAGATTGATAAAGAAGTAGCTGTTAAGAAAGCTGAAGATGCTGTTCTTGCATCAAAAGAAGTGGAAAAGACAGTGGAAGAATTGACCATTGAATTAATTGCTGCAAAGGAGTCATTCGAGTCGACACATTCTGCACACTTGGAAGCGGAGGAGAAAAGAATAGGAACAATCATGGCTAGAGACCAAGATTCTCACAACTGGGAGAAGGAACTCAAACATATAGAAGAAGAGCTCCAAAAACTAAGCCAGCAAATTTTATTAACAAAGGATCTCAAGTCTAAACTAGACACTGCCTCTGCTGTGCTGCTTGATCTAAAAGCTGAATTAGTTGCTTATATGGAATCGAAATTGAAGCATGAAAGTGATGTTGAAGGAGTTTCAAAATTAGATCCAGAGGAACTAGAGAAGAAAACACATACTGAAATAGTAGCAATTGTCGCATCAGCTAGAAAGGAACTAGAGCAAGTGAAGATCAATTTGGACGAACGAACTAATGAGGTTAATCGCTTGAAGGTGGCTGCTGAGTCACTAAAATCGGAACTTGAGCAAGAGAAGTCAACTCTTGCCAACATTAGGCAGAGAGAGGGAATGGCCTCCATTGCGGTTGCTTCGCTTGAAGCAGAACTAGAGAAGACTAGATCTGAAATAGCTGAAATACAAATAAAGGAGAAAGAGACGAAAGAAAAAATGGTTGAGCTACCTGAAAAACTACAACAAGCAGCTGAAAATGCTGATCAGGTCAACTCATTTGCTCGAGTGGCTCGTGAAGAGCTGCGAAAAGTAAAGGATGAAGCAGAGCAAGCCAAGGCTGCAGCAACTACAGTGGAAAGCAAATTACTTGCAACTCAAAAGGAGATAGAGGCAGCCAGGGCGTCTGAGAAGTTGGCCATAGCAACAATCAAAGCGTTGCAAGAGAGTGAGTCAGCTAGAAGAAACCTTGATGCAGACCCTTCCAATGGGGTGACACTTTCTTTAGAGGAATACTATGAACTCAGTAAACGTGCCCATGAGGCAGAAGAGCAAGCCAATTTGAGGGTTGTAGCTGTTAATTCTGATATTGAGATGGCCAGGGAGTCTGAATTGAAAACCTTGGAGAGATTGGAAGAAGTGAATCAAGAGATGTTTGCCATTAGGGAATCTCTGAAGGTGGCAATGGATAAAGCTGAAAAGGCAACAGAAGGAAAATTAGCCACAGAACAAGAATTAAGAAAGTGGAGGGCCGAACATGAACAGCGAAGAAAGGCTGGTGAGTCTGACCAAGGAGTCGTAAACCAAAATCAAAGCCCCACGGTCAGTTCTGAGGGGACTGGGGACGTAAATCTCCAAGAAGCAGCTTCCGAGGAAGGTAGTCTTGTACATTACTTATCGAGTTCAAAGTCCAATGTACATGCAAACAACACTGACAATGGACCTGCCCCAGAAAAAAAGAATGGTAAGAAGAAAAAGAGGTCATTGTTCCCACGTGTTTTAATGTTCTTTGCTAGAAGAAAATCAACGAAGTCCTAG 3093 0.4167 MEGVEVKTPLSESCSKWSEEKPKAERSKETSEDTNSYIEAPANQLSNGKVKSITNFTETEFTSPPHALDGQIAGQDEFFPAVNSTSTSDSMDAVKERSNQEIVIENTGPEVKHNFSDRQQMLDGSKTATYSSDDHNQIISASYHETQNMQNVHSEQKSNPSQIRVTSAADEVLGTIDSEDHNEITLPASSSEMKGLQNDHNELKFGSPQTPASSSDTEFLETVQTDDHNEIIQSSSPLEAKDLQNGNYEQKRDPPQVNVPTAATEVLGTIYSKDRNESILSCSYFEMKDLQNDHDELKIDSPDMQIASPAVEVLGMVNTNDHDEIAISTSSTRVKDLQDDLDELNISPPEVEVVNAETDVLGMIDTPTRAKQVGHIDTAAPIESVKAAVSKFGGIVDWKAHRNQTVERRQHVEQELQKAQEEIPGYRKQFEAAEHVKIQVLKELDSTKRSIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADEASVAAKAQLEVAKARFTAAISELMFVREELEGLRKEYASLEIDKEVAVKKAEDAVLASKEVEKTVEELTIELIAAKESFESTHSAHLEAEEKRIGTIMARDQDSHNWEKELKHIEEELQKLSQQILLTKDLKSKLDTASAVLLDLKAELVAYMESKLKHESDVEGVSKLDPEELEKKTHTEIVAIVASARKELEQVKINLDERTNEVNRLKVAAESLKSELEQEKSTLANIRQREGMASIAVASLEAELEKTRSEIAEIQIKEKETKEKMVELPEKLQQAAENADQVNSFARVAREELRKVKDEAEQAKAAATTVESKLLATQKEIEAARASEKLAIATIKALQESESARRNLDADPSNGVTLSLEEYYELSKRAHEAEEQANLRVVAVNSDIEMARESELKTLERLEEVNQEMFAIRESLKVAMDKAEKATEGKLATEQELRKWRAEHEQRRKAGESDQGVVNQNQSPTVSSEGTGDVNLQEAASEEGSLVHYLSSSKSNVHANNTDNGPAPEKKNGKKKKRSLFPRVLMFFARRKSTKS 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0280 1030 Coils Coil 777 807 - -
Prci8g0280 1030 Pfam Weak chloroplast movement under blue light 374 941 IPR008545 -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 947 969 - -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 34 51 - -
Prci8g0280 1030 Coils Coil 731 758 - -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 14 33 - -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 1 51 - -
Prci8g0280 1030 Coils Coil 593 620 - -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 980 1001 - -
Prci8g0280 1030 Coils Coil 512 539 - -
Prci8g0280 1030 Coils Coil 675 723 - -
Prci8g0280 1030 Coils Coil 402 480 - -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 199 218 - -
Prci8g0280 1030 Coils Coil 547 567 - -
Prci8g0280 1030 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 374 1024 - -
Prci8g0280 1030 MobiDBLite consensus disorder prediction 935 1030 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0280 Prci-Chr8 1748068 1752954 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1397 2 10565698 10570687 Prci8g0280 8 1748068 1752954 CCT
Prci8g0280 8 1748068 1752954 Prci8g0280 8 1748068 1752954 ECH