Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2643 ATGGTTTTCTCTTCTTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCAACAAGATTATCATCAAACAATGAGACAAGCGAGCTTCCACCCCTGCCTCCACAAGCCCCTCATATGGGCTCAATCAGGCCTGGATCGATGGCTGATAGAGCCCGGCTAGCCAAGATACCGCCACCGGAGGCAGCTCTGAAGTGTCCTCGCTGCGAATCTACCAACACAAAATTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCTAGGCACTTCTGCAAGACCTGTCGGCGTTACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCGGTGGGCGGAGGATGCCGCAGAAACAAGAAGACCAAGGGAAGCCGCTCCAAGTCTCCTGCAGTCTCCGACAAACAGCCACTGTCCGATCCCTCGGGCGGGGCCGCAGCCTCCGAGCTGATCGGTCAATTGCCGCCCCACGCATCTAATTTACCTTTCATGGCTTCGTTACAGAATCTGAGCCGCTGTGGCGTGGGAAGCATGGGCCTCAACTTGCAAGGGCAGAGCGATCACCACTTTTTCCCATAG 567 0.552 MVFSSSSLFRSSQLAAATRLSSNNETSELPPLPPQAPHMGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKTKGSRSKSPAVSDKQPLXSDPSGGAAASELIGQLPPHASNLPFMASLQNLSRCGVGSMGLNLQGQSDHHFFP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2643 189 MobiDBLite consensus disorder prediction 19 55 - -
Prci7g2643 189 MobiDBLite consensus disorder prediction 108 148 - -
Prci7g2643 189 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677|GO:0006355
Prci7g2643 189 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 48 141 IPR045174 GO:0003700|GO:0006355
Prci7g2643 189 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677|GO:0006355
Prci7g2643 189 Pfam Dof domain, zinc finger 62 117 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2643 Prci-Chr7 38386100 38387111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2643 33 181 C2C2-Dof Transcription Factor Family AT3G55370 55.556 4.29e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci7g2643 zf-Dof 5.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2643 - - pcin:129316822 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2643 7 38386100 38387111 Prci6g0272 6 1571079 1572669 PCT