Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2004 ATGGTTGGCCCGGAAAGCACCAATTGGCTTTTCGATTACGAGATAACTGTCCCTGATGAGAGCTTTCCTATACCTGCTTCCGGGTTCAGCTGGCCGTCGCAGGCCTTGGATGGTTCTTCGAATACCAGTGCTGAGATTGATGGCACGTTGTGGGATACTGATGGTGCGAAAGAGTCTGGTTCAAAGAAGAGGGGTAAACCTGAATCATGTGCTGCTTCTAGTTCAAAGGCATGTCGAGAAAAGCTGAGGAGGGACAGGCTGAATGACAAGTTTCTTGAATTAGGCTCTATTTTGGAGCCTGGAAGGCCTTCCAAAACAGACAAGGCAGCTATTCTCATTGATGCTGTTCGAATGGTGACACAATTACGGGTTGAAGCTGAGAAGTTGAAGGACTCAAATATGAATCTTCAAGAGAAGATTAAAGAGTTAAAGGCAGAGAAGAACGAACTACGAGATGAGAAACAGAGGCTCAAGGCTGAGAAAGAAAAGTTGGAGCAGCAGTTGAAAGCTATCAATGTTCAACCTGGTTTCATGCCTCCCCCTCCTGCAATCCCTGCGGCATTTGCTGCTCAAGGCCAAGCCCCTGGCAGCAAGTTGGTGCCTTTTATTGGTTATCCAGGAGTTGCCATGTGGCAATTTATGCCTCCTGCTTCTGTGGATACTTCACAGGACCATGTTCTCCGTCCACCAGTTGCCTAA 699 0.4764 MVGPESTNWLFDYEITVPDESFPIPASGFSWPSQALDGSSNTSAEIDGTLWDTDGAKESGSKKRGKPESCAASSSKACREKLRRDRLNDKFLELGSILEPGRPSKTDKAAILIDAVRMVTQLRVEAEKLKDSNMNLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKAINVQPGFMPPPPAIPAAFAAQGQAPGSKLVPFIGYPGVAMWQFMPPASVDTSQDHVLRPPVA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2004 232 MobiDBLite consensus disorder prediction 33 48 - -
Prci7g2004 232 SMART finulus 77 128 IPR011598 GO:0046983
Prci7g2004 232 PANTHER BHLH TRANSCRIPTION FACTOR 5 232 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Prci7g2004 232 FunFam Transcription factor bHLH34 62 120 - -
Prci7g2004 232 CDD bHLH_AtILR3_like 76 151 - -
Prci7g2004 232 Gene3D - 72 149 IPR036638 GO:0046983
Prci7g2004 232 Coils Coil 119 174 - -
Prci7g2004 232 Pfam Helix-loop-helix DNA-binding domain 75 122 IPR011598 GO:0046983
Prci7g2004 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 122 IPR011598 GO:0046983
Prci7g2004 232 MobiDBLite consensus disorder prediction 33 77 - -
Prci7g2004 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2004 Prci-Chr7 34324240 34326931 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2004 1 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 72.340 5.41e-115 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g2004 HLH 7.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2004 - - qsa:O6P43_000861 351.673