Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1631 ATGGAGATAACTAATGTTAGTGAGTATGAGGCAATTGCAAAGCAGAAATTGCCAAAAATGGTGTTTGATTACTACGCATCTGGTGCTGAGGACCAGTGGACTCTGCAAGAGAACAGAAATGCCTTTTCCAGAATCCTGTTTCGGCCACGTATTCTCATTGATGTGAGCAGGATAGACATGACCACCACTGTCTTAGGCTTCAAAATTTCCATGCCAATCATGATTGCTCCAACAGCCATGCAGAAAATGGCTCATCCTGAGGGAGAATATGCGACTGCAAGAGCTGCATCAGCTGCTGGAACGATCATGACTTTGTCCTCATGGGCTACTTCAAGTGTTGAAGAGGTGGCCTCAACAGGACCTGGAATCCGCTTTTTCCAGCTATATGTGTACAAGGACAGGAATGTTGTTGCTCAGCTAGTGAGGAGAGCTGAAAGGGCTGGCTTCAAAGCTATTGCTCTCACTGTTGACACCCCAAGGCTTGGTCGCAGAGAAGCTGACATCAAGAACAGATTCACCTTGCCACCATTCTTGACGTTGAAGAACTTCGAAGGTTTGGATCTTGGAAAGATGGACATGGCTGAGGACTCTGGACTTGCTAGCTATGTTGCTGGCCAAATTGATCGTACTCTCAGCTGGAAGGATGTGAAGTGGCTTCAAACAATCACTCAACTTCCAATTCTGGTGAAGGGTGTTCTGACTGCCGAGGACACAAGGCTCGCAATTCAGGCAGGAGCAGCCGGAATTATTGTGTCTAATCATGGTGCTCGACAGCTCGATTATGTGCCTGCCACTATAATGGCGTTAGAAGAGGTTGTCAAAGCTGCTCAAGGCCGTGTTCCTGTGTTCTTGGATGGTGGTGTTCGTCGTGGAACTGATGTCTTCAAGGCCCTTGCATTAGGAGCCTCCGGCATATTTATCATGTCATTATCTCTAAGTGAAAAATACATGAAGCAGTCTCATACCAACTCAGATAGACAGAGATACAGTCATATAGAACAGATTGTGTCATTCACATGTAAAACAGTGACTTCTGTATAA 1041 0.4592 MEITNVSEYEAIAKQKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSRIDMTTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDMAEDSGLASYVAGQIDRTLSWKDVKWLQTITQLPILVKGVLTAEDTRLAIQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIMSLSLSEKYMKQSHTNSDRQRYSHIEQIVSFTCKTVTSV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1631 346 CDD alpha_hydroxyacid_oxid_FMN 7 307 IPR012133 GO:0010181|GO:0016491
Prci7g1631 346 Gene3D Aldolase class I 1 320 IPR013785 -
Prci7g1631 346 ProSiteProfiles FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. 1 346 IPR037396 -
Prci7g1631 346 PANTHER S -2-HYDROXY-ACID OXIDASE-RELATED 2 307 - -
Prci7g1631 346 PIRSF Al-hdrx_acd_dh 1 308 IPR012133 GO:0010181|GO:0016491
Prci7g1631 346 SUPERFAMILY FMN-linked oxidoreductases 2 310 - -
Prci7g1631 346 ProSitePatterns FMN-dependent alpha-hydroxy acid dehydrogenases active site. 252 258 IPR008259 GO:0016491
Prci7g1631 346 Pfam FMN-dependent dehydrogenase 13 307 IPR000262 GO:0016491
Prci7g1631 346 FunFam peroxisomal (S)-2-hydroxy-acid oxidase GLO1 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1631 Prci-Chr7 31984070 31987521 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1631 7 31984070 31987521 Prci7g1631 7 31984070 31987521 ECH