Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1597 ATGCTTATAATGGTGGGCAACGCTCAAGGAGCAATGGCTTCTCTTTCTTCCCCTGTCAGTTTGGGAGGTCTAGTTGGAGTGAGTTCCTCTGGAAGGACCCACTCTACTGGAAGGAGAGTTTCTCTTTCTGGAGGGAGCTTTAAGTGTAGAAGGACATGGCATTGTGTCTCCTTGTCCCTTTGTAGATATTCAGCGACTACGACGGATTTCATACCTGACCAAAGCAATGCAGTGTCCCTTGACTCTAACAGTGACAGAGGAAGTACAGGTACTGGAGATAATAATGCTGGTTTTGTCCTTAAGCCACCTCCAAAGCCTGTATTGAAGTCTTCAGAGACCAAGGGTAACTCCATTTTAGGTGCACACTCTGAAGGGTGGGATCCCTCCAAAGCTAAGGAATTTGGTAATGAAAAGTTAGATGATGTAGAAGAGAGAAATAAGGTGATTGAGTCACTTGGAGAGGTGTTGGAGAAGGCTGAAAAGCTGGAGAGTTCAAAGTTGGATGGCAAAAGAAATAATGGACCGGTAAGCAAACCAGCAATATCTAATACAACCACCAATCCTAAGACTGATAAACTGGCAAACTCAACAACAAACCAGCAGTCTAGAACTGTGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCTAATGTGCAGAAGGTTGCCAAGGAAGCACCCAAGCCTAAAACTAAGAATGGAGGAGGGAAATCTCAAACAGGGGGAGGAGGAAAGGTGACATTTCAGTCGCCTACTCCTCCACGAGCTCCTCAGCCACCATCAAATCCTCAGCCTTTGTTACAGGCTAAACCATCTGTAGCTCCCCCGCCCATCAAGAAACCTGTTTTGAGGGACAATGGAGCTGCTGGCACACCTGTTAAAGATAAAGAGAGGAAGCCAATTTTGATTGACAAGTTTGCTATCAAGAAACCAGTAGTTGATCCTCTCATTGCTCAAGCTGTTCTAGCTCCTAAAAAACCAGGAAAGGGCCCTCCTTCTGGAAAGTTTAAAGATGATTACCGAAAGAAAAGTGCTCCAACTGGGGGAGGACCAAGGAGAAGAGTATTAGATGATGATGTCGTTGAGATTCCTGATGAAGATACATCAGAACTTGATGTCTCTATTCCTGGTGCTGCAACGGCAAGAAAAGGCAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTTCAGGCTGCCAAGGAGGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTTAGTGATAAAGGTATGCTGATAGAGGAGTTAGCCTACAACTTGGCAATCAGTGATGGTGAAATCCTGGGTTATCTATACTCCAAGGGGATTAAACCAGATGGGGTACAAACTCTGGACAAAGACATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAAGTAATAGATGCTGATCCTATCAAAGTTGAAGGATTGGTGAAGAAAAGGGAAATTCTAGATGGAGATGATCTTGGCAAACTCAAAGATAGGCCTCCTGTCATTACTATAATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGACCATATTCGGAAGAGCAAGTTAGTTGCTTCAGAAGCCGGTGGGATTACACAAGGGATTGGGGCATATAAAGTTCAAGTTCCTGTTGATGGCAAATTGCTGCCTTGTGTTTTCCTTGACACGCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACAGATATTGCTATTATAGTTGTTGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCCATTGCTCATGCCAAAGCAGCTGGAGTACCCATAATTATTGCTATAAACAAGATAGATAAAGATGGTGCAAATCCAGACCGAGTTATGCAAGAGCTGTCTTCAATTGGTCTAATGCCTGAAGACTGGGGTGGCGACATCCCAATGGTTCAGATAAGTGCTCTTAAAGGGGAGAATGTAGATGATCTTTTGGAAACTGTGATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAGTGCAAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCAAAGGGACCATTTGCTACTTTTATCGTGCAGAATGGCACCCTTAAAAGGGGAGATGTAGTAGTGTGCGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAACGTGTTGATTCAGCTACACCATCTATACCTGTACAGATTATTGGCTTGAATAACGTTCCGATTGCTGGTGATGAATTTGAGATTGTTGACTCCCTTGATGCTGCCCGTGAAAAGGCAGAGTCCCGTGCTGCATCATTAAGAAACGAGCGTATTTCAGCTAAGGCAGGGGATGGCAAGGTCACCCTTTCTTCTTTAGCTTCTGCAGTTTCAGCAGGAAAGCTTTCCGGATTAGACTTACACCAGCTAAACATTATCCTGAAGGTTGATCTTCAGGGATCCATTGAAGCAATCAGACAAGCCCTGCGGGTGCTACCACAAGATAATGTGACATTGAAGTTTTTGTTGGAAGCAACAGGTGATGTTAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCTATTATTTTGGGATTTAATATCAGAGTACCAGGTTCTGTAAAAAGCTATGGAAATAAGCTTGTTGAGATTAGATCATATAAAGTTATATATGACCTAATTGATGACGTGAGGAGTGCGATGGAGGGATTACTGGAGCCTGTCGAGGAACAAGTAATGATTGGCTTAGCTGAAGTAAGGGCCACGTTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACAGAGGGAAAAGTATTAAAAGACTGTGGCATTCGGGTCATTCGTAAGGGAAAGGTTGTTCACATAGGTGTTGTTGATTCTTTGAGACGAGTAAAGGAGACTGTGAAAGAGGTAAATGCTGGTCTAGAGTGTGGGATTGGTTTAGAAGATTACGATGACTGGGAAGATGGAGATATTGTCGAGGCGTTCAACACCGTTCAGAAGAAGCGGACCCTTGAAGAGGCTTCAGCTTCAATGGCGGCTGCAGTGGAAGAAGTAGGAGTAGAGTTGTAG 3069 0.4448 MLIMVGNAQGAMASLSSPVSLGGLVGVSSSGRTHSTGRRVSLSGGSFKCRRTWHCVSLSLCRYSATTTDFIPDQSNAVSLDSNSDRGSTGTGDNNAGFVLKPPPKPVLKSSETKGNSILGAHSEGWDPSKAKEFGNEKLDDVEERNKVIESLGEVLEKAEKLESSKLDGKRNNGPVSKPAISNTTTNPKTDKLANSTTNQQSRTVKSVWRKGDTVANVQKVAKEAPKPKTKNGGGKSQTGGGGKVTFQSPTPPRAPQPPSNPQPLLQAKPSVAPPPIKKPVLRDNGAAGTPVKDKERKPILIDKFAIKKPVVDPLIAQAVLAPKKPGKGPPSGKFKDDYRKKSAPTGGGPRRRVLDDDVVEIPDEDTSELDVSIPGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISDGEILGYLYSKGIKPDGVQTLDKDMVKMICKEQGVEVIDADPIKVEGLVKKREILDGDDLGKLKDRPPVITIMGHVDHGKTTLLDHIRKSKLVASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALKGENVDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAFGKVRALFDDGGKRVDSATPSIPVQIIGLNNVPIAGDEFEIVDSLDAAREKAESRAASLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIILKVDLQGSIEAIRQALRVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNIRVPGSVKSYAXNKLVEIRSYKVIYDLIDDVRSAMEGLLEPVEEQVMIGLAEVRATFSSGSGRVAGCMVTEGKVLKDCGIRVIRKGKVVHIGVVDSLRRVKETVKEVNAGLECGIGLEDYDDWEDGDIVEAFNTVQKKRTLEEASASMAAAVEEVGVEL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1597 1023 PRINTS GTP-binding elongation factor signature 550 560 IPR000795 GO:0003924|GO:0005525
Prci7g1597 1023 PRINTS GTP-binding elongation factor signature 602 611 IPR000795 GO:0003924|GO:0005525
Prci7g1597 1023 PRINTS GTP-binding elongation factor signature 498 511 IPR000795 GO:0003924|GO:0005525
Prci7g1597 1023 PRINTS GTP-binding elongation factor signature 566 577 IPR000795 GO:0003924|GO:0005525
Prci7g1597 1023 FunFam Translation initiation factor IF-2 491 669 - -
Prci7g1597 1023 Coils Coil 753 773 - -
Prci7g1597 1023 MobiDBLite consensus disorder prediction 74 95 - -
Prci7g1597 1023 Gene3D - 491 669 IPR027417 -
Prci7g1597 1023 FunFam Translation initiation factor IF-2 802 907 - -
Prci7g1597 1023 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 801 913 IPR036925 -
Prci7g1597 1023 Hamap Translation initiation factor IF-2 [infB]. 7 1003 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci7g1597 1023 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 173 1011 IPR015760 -
Prci7g1597 1023 FunFam Translation initiation factor IF-2 907 1004 - -
Prci7g1597 1023 MobiDBLite consensus disorder prediction 232 246 - -
Prci7g1597 1023 CDD mtIF2_IVc 913 995 - -
Prci7g1597 1023 SUPERFAMILY Translation proteins 908 1003 IPR009000 -
Prci7g1597 1023 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 494 667 IPR000795 GO:0003924|GO:0005525
Prci7g1597 1023 MobiDBLite consensus disorder prediction 163 300 - -
Prci7g1597 1023 MobiDBLite consensus disorder prediction 74 138 - -
Prci7g1597 1023 ProSitePatterns Initiation factor 2 signature. 956 978 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci7g1597 1023 MobiDBLite consensus disorder prediction 330 356 - -
Prci7g1597 1023 Gene3D Translation factors 908 1004 - -
Prci7g1597 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 670 IPR027417 -
Prci7g1597 1023 Gene3D - 802 907 IPR036925 -
Prci7g1597 1023 MobiDBLite consensus disorder prediction 176 208 - -
Prci7g1597 1023 Pfam Translation-initiation factor 2 802 895 IPR023115 -
Prci7g1597 1023 FunFam Translation initiation factor IF-2 670 788 - -
Prci7g1597 1023 Pfam Elongation factor Tu GTP binding domain 499 659 IPR000795 GO:0003924|GO:0005525
Prci7g1597 1023 MobiDBLite consensus disorder prediction 316 356 - -
Prci7g1597 1023 CDD IF2_eIF5B 497 663 - -
Prci7g1597 1023 MobiDBLite consensus disorder prediction 251 277 - -
Prci7g1597 1023 NCBIfam translation initiation factor IF-2 416 1005 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci7g1597 1023 CDD IF2_mtIF2_II 674 767 IPR044145 -
Prci7g1597 1023 Gene3D Translation factors 670 786 - -
Prci7g1597 1023 NCBIfam small GTP-binding protein domain 496 657 IPR005225 GO:0005525
Prci7g1597 1023 SUPERFAMILY Translation proteins 670 753 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1597 Prci-Chr7 31738828 31748283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1597 495 893 Eukaryotic Initiation Factors Gene Family AT1G76810 28.970 4.64e-27 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1597 7 31738828 31748283 Prci7g1597 7 31738828 31748283 ECH