Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2869 ATGAAGGAAGGTGGTAGAAAACATGGTGCAATGTCGCCGTGTGCGGCGTGCAAGCTTCTCCGGAGGCGATGTGCTCAGGATTGCCTCTTTGCTCCTTACTTTCCTGCGGATGAACCTCAAAAGTTTGCAAGTGTTCACAAGGTTTTTGGTGCTAGCAATGTCAATAAAATGTTACAGGAACTACCAGAGGAACAGAGGAGTGATGCAGTGAGTTCAATGGTGTACGAAGCAAATGCGAGGATGAGGGACCCAGTGTATGGATGTGTGGGGGCGATATCGTCTCTTCAGCAACAGGTTGATGTGCTTCAGACCCAACTGGCTCTTGCTCAGGCCGAGCTTGTTCACATCAGAAATAATCATCAACCTTCTTCATCTTCAAACCAGCCCCAATCCTCCTCTCTTGATCACGCCAAGTCTTCTCTTTTTGCACTCGACAATGTCACCGAGTCCTTGTGGTCCTGCTAA 465 0.486 MKEGGRKHGAMSPCAACKLLRRRCAQDCLFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEEQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQVDVLQTQLALAQAELVHIRNNHQPSSSSNQPQSSSLDHAKSSLFALDNVTESLWSC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2869 154 Coils Coil 92 119 - -
Prci6g2869 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 137 - -
Prci6g2869 154 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Prci6g2869 154 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2869 Prci-Chr6 41638135 41641626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2869 1 117 AS2 family AT1G31320 86.325 6.15e-66 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci6g2869 LOB 1.5e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2869 6 41638135 41641626 Prci6g2869 6 41638135 41641626 ECH