Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2854 TTCAAAGTCGCTCGACTTTCCGGTTTTCATAGGACATCAACTTTTTCGAACCACAGCTCTGATGCCATTGGTTTGCCTTCTGGACTCAATTGTTTACAGCAAAATTTTCCTTGCAATCGCGGTATAGGAAGATATTATAACTTTGCAATCAATTGTGGTGGTCCTCCCATTACGTCAAATGGAATTGCATATGAAAAAGATGATGAGACACTTGGCCCTGCTACTTATTTTGCTACTGATACAAACATATGGGCAGTAAGCAATGTTGGATTACTTCCCGGCGACAAATACACAAGTTCTGTGGATACTGATATTCATTACACTAATACTCTTGATCTGAATCCAAAGCTTTTCCAGACAGCCCGGCTTTCTGCTTCTTCATTAAGATACTATGGCTTGGGGTTGGAAAATGGGGATTACAATGTCACCCTTCAATTTGCAGAAACATATATTCTAGATAATACTTCATCATGGAGAAGTCTTGTAAGACGGGTCTTTGATATTTATATCCAGGGGAATCGTGTTTCTAGAAATTTTGACATAAGAAGGGAAGCTGGGGGTGCCTCATTTAGAGCTGTCCAAAAGGAATTTCGAGCTCATGTATCAGAAAACTATCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTGGAGACGTGCCAATTTACGGTCCTCTGATTTCAGCAATCAATGCTACCCCAGATTTCAAACCCACTGTCAGTAACAGACCTCCAACTACTAAAAAGAGAAGAACCGGTCTGATTATGGGAATTGTTGCTATTGGAGTTGTAAGCTTTCTGTCTGTTCTTGTGGTTTTCTATATCATTCAGAGAAGAAAGTCTCATGGAAACAGCGATGAAGAGCTATCAGATGTCGATATAAAGCCATACACTTTCAGCTATTCTGAGCTAAAGAATGCTACAAATGACTTCAATCCTGGCAACAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGAACACTTGACGATGGAAGGGAAATTGCTGCGAAACAACTGTCTGTAGGATCTCGTCAAGGAAAGAGCCAGTTCACAGCAGAGATTGCTACTATATCTAGTGTGCAGCATCGTAATCTTGTTAAGTTATATGGATATTGCATTGAAGGAGATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAGGAGTCTTGATCAAGCATTATTTGGACATTGTTTAATCCTAAAGTGGCCCACACGATATGATATTTGCTTGGGTATAGCAAGAGGTTTATCTTATCTTCATGAAGAATCACAGCTCCGAATTGTACATCGTGATGTAAAAGCTAGTAATATTTTGCTTGATCACAAGCTGGTCCCTAAAATATCTGATTTTGGTTTAGCCAAATTATATGATGATGAAAAGAGCCATATTAGCACTCGTATAGCTGGGACAATCGGATACCTTACTCCCGAGTATGCTATGCGTGGGCACCTCACAGAGAAAGCAGATGTGTTTTCTTTTGGTGTTTTGGCCTTAGAGATCCTTAGTGGGGGACCAAATTCTGATTCAAGCATGGACAGGGATAAGATGTATCTACTAGAATGGGTTTGGCAGCTACATGAAAATAACTGTATATTTGAACTAGTAGATCCTAAACTATCATCAGATATCAATGAGGAAGAAGTTAAAAGAATTGTAGGGATATCTCTTTTGTGCACTCAATCATCACCATTGTTAAGGCCAGCAATGTCCCATGTTGTGGCAATGCTTATGGGAAATAGTGAAGTGGGCACTGTAACTTCAAGGCCTGGATACCTGACAGACTGGAAATTTGATGATGTGAGCGGCTTCATAACTGGCCAATGGCAAAGCAATCGGATGCAAGTCAGAACAACTCAACAGAAAAGTATTAGGGTAGTTAGCGATGCAAACCAAACACCTGTGGATGATTCTAAACCTATCCTTCTTCAAACTCCTAGTGAAAGCATGTAA 1959 0.4012 FKVARLSGFHRTSTFSNHSSDAIGLPSGLNCLQQNFPCNRGIGRYYNFAINCGGPPITSNGIAYEKDDETLGPATYFATDTNIWAVSNVGLLPGDKYTSSVDTDIHYTNTLDLNPKLFQTARLSASSLRYYGLGLENGDYNVTLQFAETYILDNTSSWRSLVRRVFDIYIQGNRVSRNFDIRREAGGASFRAVQKEFRAHVSENYLEIHLFWAGKGTGDVPIYGPLISAINATPDFKPTVSNRPPTTKKRRTGLIMGIVAIGVVSFLSVLVVFYIIQRRKSHGNSDEELSDVDIKPYTFSYSELKNATNDFNPGNKLGEGGFGPVYKGTLDDGREIAAKQLSVGSRQGKSQFTAEIATISSVQHRNLVKLYGYCIEGDKRLLVYEYLENRSLDQALFGHCLILKWPTRYDICLGIARGLSYLHEESQLRIVHRDVKASNILLDHKLVPKISDFGLAKLYDDEKSHISTRIAGTIGYLTPEYAMRGHLTEKADVFSFGVLALEILSGGPNSDSSMDRDKMYLLEWVWQLHENNCIFELVDPKLSSDINEEEVKRIVGISLLCTQSSPLLRPAMSHVVAMLMGNSEVGTVTSRPGYLTDWKFDDVSGFITGQWQSNRMQVRTTQQKSIRVVSDANQTPVDDSKPILLQTPSESM 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2854 652 Pfam Malectin domain 47 230 IPR021720 -
Prci6g2854 652 Gene3D - 45 233 - -
Prci6g2854 652 CDD STKc_IRAK 317 581 - -
Prci6g2854 652 Gene3D Phosphorylase Kinase; domain 1 273 386 - -
Prci6g2854 652 FunFam Leucine-rich repeat receptor-like protein kinase 280 386 - -
Prci6g2854 652 FunFam Putative LRR receptor-like serine/threonine-protein kinase 387 591 - -
Prci6g2854 652 Pfam Protein tyrosine and serine/threonine kinase 314 579 IPR001245 GO:0004672|GO:0006468
Prci6g2854 652 SMART serkin_6 311 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2854 652 SUPERFAMILY Protein kinase-like (PK-like) 292 584 IPR011009 -
Prci6g2854 652 Gene3D Transferase(Phosphotransferase) domain 1 387 590 - -
Prci6g2854 652 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2854 652 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 619 - -
Prci6g2854 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Prci6g2854 652 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2854 Prci-Chr6 41486347 41493011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2854 27 644 Receptor kinase-like Gene Family AT1G56120 61.085 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2854 PK_Tyr_Ser-Thr 1.2e-45 CL0016