Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2645 ATGGCGCCCAAAACTCCTAGAGTCACGAGAAATCCTGAATTGGTAAGAGGAATAGGAAAGTACTCGAGGTCGAAGATGTACCACAAGAGGGGTTTGTGGGCCATCAAGGCTAAAAACGGTGGCGTTTTCCCGCGCCACGATCCCAAACCTAAGCCCACAGCTCCGGCCGAGAAGCCTCCCAAGTTCTACCCGGCCGACGATGTTAAGAAGCCCCTTGTCAACAAGCACAAACCTAAACCTACTAAACTTAGGGCCAGCATTACTCCCGGGACAGTATTGATACTTCTTGCTGGGAGATTCATGGGAAAGAGAGTAGTGTTTCTGAAGCAGCTTCCTTCGGGATTGCTTCTTGTTACTGGTCCATTCAAGATAAACGGAGTTCCTCTGAGACGTGTAAGCCAGTCTTATGTCATTGGAACATCCACCAAGGTAGACATCTCTGGAGTTAATGTGGAAAAGTTTGATGACAAGTACTTTGCCAAGAAGGCCGAGAAGAAGAAGAAGAAGGGAGAGGGAGAATTCTTTGAAGCAGAAAAGGAGGAGAAAAACGTGATCCCTCAAGAGAAAAAAGATGACCAGAAAGTAGTGGACACAGAATTGATAAAAGCCATAGACGGTGTTCCAGACTTGAAGGCTTATTTGGGTGCAAGGTTTTCTCTCAAGGCCGGCATGAAGCCTCATGAGCTAGTCTTCTAA 696 0.4698 MAPKTPRVTRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDPKPKPTAPAEKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDISGVNVEKFDDKYFAKKAEKKKKKGEGEFFEAEKEEKNVIPQEKKDDQKVVDTELIKAIDGVPDLKAYLGARFSLKAGMKPHELVF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2645 231 CDD KOW_RPL6 79 231 IPR041997 -
Prci6g2645 231 Pfam Ribosomal protein L6, N-terminal domain 5 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Prci6g2645 231 MobiDBLite consensus disorder prediction 38 83 - -
Prci6g2645 231 Coils Coil 160 180 - -
Prci6g2645 231 FunFam 60S ribosomal protein L6 85 169 - -
Prci6g2645 231 Gene3D - 85 169 IPR014722 -
Prci6g2645 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Prci6g2645 231 SUPERFAMILY Translation proteins SH3-like domain 85 174 IPR008991 -
Prci6g2645 231 Pfam Ribosomal protein L6e 124 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2645 Prci-Chr6 38290207 38292234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2645 4 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 82.456 3.80e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2645 K02934 - gmx:100784101 368.622