Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2582 ATGGAGTCAGAAGGGGAAGCTGGGGGAAAGCCTATGACAGTGTTGGGTGGCCAAGTCTGCCAGATCTGTGGTGATAATGTTGGGAAGACTCTGGATGGTGAGCCATTCATTGCATGCGATGTTTGTGGTTTTCCTGTATGCAGGCCATGCTATGAGTACGAAAGGAAGGATGGGAATCAGTCTTGTCCTCAGTGCAAAACCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTGTAGGAGATAGAGAAGAGGATGTTGCTGCTGCTGATGGTGCTAGTGACTATGAGTCAGAGGGCCAAAGCCAAAAGAAGATATCGGAGCGCATGTTAAGCTGGCACATGAAGCATGGACAGTCAGAGGAGGTTGCTGCTCCAAAGTATGATAAGGAGGTTCCTCACAACCACATTCCTTTGCTAACCAGTGGACAAGAGGTCTCTGGAGAATTATCAGCTGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGGAATTGGTGGTGGCAAACGGATCCATAATCTGACATATTCATCTGATATTAATCAATCACCAAATATTAGGGGCATGGATGCAGGAATGGGTAATGTAGCATGGAAAGAGAGGGTTGATGGCTGGAAGATGAAGCAGGAAAAGAATGCTGTTCCAATGAGCACTGGCCAGGCTACTTCTGAAAGAGGAGCAGGAGATATCGATGCCAGCACTGATGTGCTCATGGATGATTCCTTGTTGAATGATGAAGCTCGACAACCACTCTCAAGGAAGGTTTCTATTCCATCATCTAGGATTAACCCGTACCGCATGGTCATTGTTCTGCGGCTGGTTATCCTCTGTATTTTTTTGCATTACCGAATAACAAATCCTGTACAAAATGCATATGCATTGTGGTTGATATCGGTCATATGTGAGATATGGTTTGCCATATCTTGGATTTTAGATCAGTTCCCTAAGTGGCTCCCTGTGAACCGCGAAACATATCTTGACAGGCTCTCACTCAGGTACGAACGGGAAGGAGAACCATCACAACTGGCAGCTGTTGACATTTTTGTTAGTACTGTTGATCCTTTAAAGGAGCCCCCACTCGTGACTGCCAATACTGTATTATCCATTCTTGCAGTCGATTACCCTGTTGATAAGGTCTCCTGCTATGTATCTGATGATGGTGCAGCTATGTTGACATTTGAAGCACTAGCTGAGACATCAGAGTTTGCCAGGAAATGGGTTCCTTTTTGCAAGAAGTACACTATCGAACCTCGGGCTCCAGAATGGTACTTCGCGCAGAAGGTTGACTACTTGAAGGATAAGGTTCATCCATCATTTGTCAAAGAACGAAGAGCCATGAAGAGAGACTATGAAGAATTCAAAGTCCGTGTTAATGGACTTGTTGCAAAGGCACAGAAAGTTCCTGAAGAAGGATGGGTAATGCAAGATGGCACTCCATGGCCTGGAAACAACACTAGAGACCATCCGGGAATGATCCAGGTGTTTTTGGGCCAAAGTGGAGGACTTGACACTGACGGTAATGAGCTACCACGCTTAGTATATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAGCATCACAAGAAGGCCGGTGCCATGAATGCGCTGGTTCGTGTATCAGCTGTCCTTACTAATGGGCCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGTTTTATGATGGATCCCAACCTTGGGAAAAATGTTTGCTATGTTCAGTTCCCTCAAAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAACACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGACCTGTGTATGTCGGTACTGGATGTGTCTTCAATAGAACAGCCTTGTATGGTTATGAACCTCCTGTTAAACCCAAGCATAAGAAACTTGGGATGTCTTCTCTCTGTGGTGGAAATCGAAAGAAGAAGTCTAAATCTAGCAAGAAAGGCTCAGACAAGAAAAAACCTGGCAAAAATGTTGACCCAACTGTGCCCATCTTCAACCTAGAAGATATAGAAGAAGGAGTTGAAGGTTCTGGATTTGATGATGAGAAGACACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCTGTTTTTGTTGCATCTACACTTATGGAGAATGGTGGTGTTCCCCAGTCTGCTACCCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATTAGTTGTGGTTACGAGGACAAGTCAGAATGGGGAACTGAGATAGGATGGATCTATGGTTCTGTCACAGAAGATATTCTCACTGGATTTAAGATGCATGCGCGAGGATGGCGGTCTGTTTACTGCATGCCCAAGCTGCCAGCGTTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAATCAAGTGCTTCGATGGGCTCTGGGTTCTGTGGAAATTCTTCTAAGTAGACACTGCCCCATTTGGTATGGTTATAGTGGAAGGCTCAAGTGGCTTGAGAGGTTCGCTTATGTGAACACCACAATCTACCCCATCACTTCCATTCCCCTCCTCATGTATTGTACCTTGCCAGCCATCTGTCTCCTCACAAATAAGTTCATTATCCCACAGATTAGCAACATTGCAAGTATATGGTTTATCTCCCTCTTTCTTTCCATTTTTGCAACTGGTATCCTGGAGATGAGGTGGAGTGGTGTTGGAATCGATGAGTGGTGGAGGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCCGCCCATCTCTTCGCCGTGTTCCAAGGGTTGCTCAAAGTACTCGCCGGAATTGACACCAACTTCACCGTCACATCTAAAGCATCAGATGAAGAAGGCGACTTTGCTGAACTCTACATGTTCAAATGGACCACCCTCCTCATCCCGCCCACCACCCTTCTCATCATAAACCTGGTCGGAGTAGTCGCCGGCGTCTCCTACGCCATCAACAGTGGTTACCAGTCGTGGGGCCCACTCTTTGGTAAGCTCTTCTTCGCATTCTGGGTGATCATCCATCTCTACCCTTTCCTCAAAGGTCTCATGGGAAGGCAGAACCGGACGCCAACCATTGTTGTGGTCTGGTCCATTCTACTTGCCTCCATCTTCTCTTTGTTATGGGTCCGGATCGACCCGTTTACGACCCGAGTCACCGGTCCTGATTCTGAACAATGTGGAATCAACTGCTAG 3216 0.4583 MESEGEAGGKPMTVLGGQVCQICGDNVGKTLDGEPFIACDVCGFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAVVGDREEDVAAADGASDYESEGQSQKKISERMLSWHMKHGQSEEVAAPKYDKEVPHNHIPLLTSGQEVSGELSAASPERLSMASPGIGGGKRIHNLTYSSDINQSPNIRGMDAGMGNVAWKERVDGWKMKQEKNAVPMSTGQATSERGAGDIDASTDVLMDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVQNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYTIEPRAPEWYFAQKVDYLKDKVHPSFVKERRAMKRDYEEFKVRVNGLVAKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKPKHKKLGIXSSLCGGNRKKKSKSSKKGSDKKKPGKNVDPTVPIFNLEDIEEGVEGSGFDDEKTLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSVYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYVNTTIYPITSIPLLMYCTLPAICLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEEGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDSEQCGINC 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2582 1072 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 247 1039 - -
Prci6g2582 1072 Pfam Cellulose synthase 344 1065 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci6g2582 1072 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Prci6g2582 1072 SUPERFAMILY Nucleotide-diphospho-sugar transferases 358 881 IPR029044 -
Prci6g2582 1072 SUPERFAMILY RING/U-box 5 87 - -
Prci6g2582 1072 FunFam Cellulose synthase 461 635 - -
Prci6g2582 1072 CDD mRING-HC-C4C4_CesA 18 68 - -
Prci6g2582 1072 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Prci6g2582 1072 MobiDBLite consensus disorder prediction 77 102 - -
Prci6g2582 1072 ProSiteProfiles Zinc finger RING-type profile. 20 66 IPR001841 -
Prci6g2582 1072 MobiDBLite consensus disorder prediction 645 678 - -
Prci6g2582 1072 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 485 635 IPR029044 -
Prci6g2582 1072 FunFam Cellulose synthase 3 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2582 Prci-Chr6 37492879 37500964 Dispersed/Transposed