Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci6g2393 | CATTGCTTCTTCAAGATTTTTGGCATGATTTTGGTTCAAAATTCCAACCAATTAATACTGAGCATGTGTGCTATCATTGTGAAGGGTCATTGGAGTAATCTGTTGAAGCTTGAGAAGGCTTCTGCTCTTACTTCTTCCACCATTCACCAGGTACTTGTGCAACTCTCTCTCCATGGCTTTGCTCCATCTCATTCCTTGTCATTCTTCAAATGGGCTGAATCAGTTCCAAATTATAAGCACTCTTTGCATTGTTCATGGTCCATGCTTCATATCCTTGTAAAGCATAAACATTTTAGAACCGCACAAGAGATGCTTGAAAAAATTGCCCGCAGGGATTTTCTTTCATCGCCATCAGTTTTGAGAGCTTTGATTGAAATTCAACATGACCCAGAAGTGAATTCGCATATATTGAGTTGGCTTGTAATACATCTTACAAAATCAAAGATGACCGATGATGCCCTTCAGGTTTTTGAGCAGATGAGGCTATATAAATTGAAACCTCATTTTCATGCCTGTACTGTGCTTTTGAATTCTTTGGTCAAGGATGGGGTTACTAGCATGGTATGGAAGGTTTACAAACAAATGGTTCAAGTTGGTATTATTCCTAATATACATATCTATAATGTGTTAATCCATGCTTGTTCCAAATCAGGAGATGTGGAGAGGGCAGAACATTTACTGAATGAGATGGAAGTGAAGGGTGTGTTTCCTGATATTTTCACTTACAATACTTTGATATCATTATACTGCAAGAGAAGTATGCACTACGAGGCTTTATCTATCCAGGACAGAATGGAAAGAGAGGGAATAAATCTTGACATTGTTAGTTACAATTCTCTTATTTATGGATTTTGTAGAGAGGGTAGGATGAGAGAAGCCATGAGGATATTCAGCAACATCAAAGGTGCAATTCCCAATAATGTTACATACACTACATTGATCGATGGGTATTGTAAAATAAATGACCTTGAGCAAGCTCTGAAATTGCGTGAGATGATGGAGGCTAAGGGATTGTACCCTGGAGTTGTTACTTATAACTCAATTTTGCGTAAGCTATGTCAGGATGGTAGAATAAGAGATGCAAATAAACTTTTGACTGAGATGAGTGAAAGAAAAGTTCAACCTGATAGTGTCACATGTAACACGTTGATAAATGCTTACTGCAAGATAGGAGATATGAAATCTGCATTGAAATTTAAGAACAAGATGTTAGAGGCTGGATTGAAACCTGACCCATTTACATTCAAAGCATTAATTCATGGGTTCTGCAAGATGAAAGAGCTGGAAAGTGCCAAGGAGATGTTGTTTTCCATGCTTGATGCTGGGTTTTCCCCCAATTACTGCGCTTATTCATGGATAGTAGATGGTTACTGCAATAAAGACAATGAAGAGGCAGTTGTTACGCTCCCAGATGAGTTTCTTAGAAGAGGTCTTTGCATTGATGTTTCAATATTCAGGGCATTAATAAGAAGGTTATGTAAGTTAGAAAGGATACCATGTGCTCAGAAGTTATTTAATCTTATGGAAGGGAGAGGTATATCAGGTGACTGCGTTATTTATACAAGTCTTGCTTATGCATATTGGAAATCAGGGAATGCAAAGGTTGCATCAAATATATTCGAAGAGATGACTAGGAGGAGGTTGATGATAACGGGCAAAATCTATAAATGTTTTGGTAATCCTCTTGATAGTGAAAACAAAACTTCATGTTCATTCTGGAATTATGTGGTGGATAGGGGCCTTATGTCAAGAAATACCATGAATAAAGTAAAGAAGATGGAATTATGA | 1788 | 0.3747 | HCFFKIFGMILVQNSNQLILSMCAIIVKGHWSNLLKLEKASALTSSTIHQVLVQLSLHGFAPSHSLSFFKWAESVPNYKHSLHCSWSMLHILVKHKHFRTAQEMLEKIARRDFLSSPSVLRALIEIQHDPEVNSHILSWLVIHLTKSKMTDDALQVFEQMRLYKLKPHFHACTVLLNSLVKDGVTSMVWKVYKQMVQVGIIPNIHIYNVLIHACSKSGDVERAEHLLNEMEVKGVFPDIFTYNTLISLYCKRSMHYEALSIQDRMEREGINLDIVSYNSLIYGFCREGRMREAMRIFSNIKGAIPNNVTYTTLIDGYCKINDLEQALKLREMMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLTEMSERKVQPDSVTCNTLINAYCKIGDMKSALKFKNKMLEAGLKPDPFTFKALIHGFCKMKELESAKEMLFSMLDAGFSPNYCAYSWIVDGYCNKDNEEAVVTLPDEFLRRGLCIDVSIFRALIRRLCKLERIPCAQKLFNLMEGRGISGDCVIYTSLAYAYWKSGNAKVASNIFEEMTRRRLMITGKIYKCFGNPLDSENKTSCSFWNYVVDRGLMSRNTMNKVKKMEL | 595 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci6g2393 | 595 | PANTHER | MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 | 87 | 411 | - | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 341 | 375 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 411 | 445 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 376 | 410 | IPR002885 | - | |
| Prci6g2393 | 595 | Pfam | Pentatricopeptide repeat domain | 504 | 547 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 308 | 341 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 240 | 273 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 275 | 299 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 171 | 204 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 206 | 239 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 413 | 446 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 378 | 411 | IPR002885 | - | |
| Prci6g2393 | 595 | NCBIfam | pentatricopeptide repeat | 343 | 377 | IPR002885 | - | |
| Prci6g2393 | 595 | Gene3D | Tetratricopeptide repeat domain | 336 | 469 | IPR011990 | GO:0005515 | |
| Prci6g2393 | 595 | Gene3D | Tetratricopeptide repeat domain | 470 | 567 | IPR011990 | GO:0005515 | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 306 | 340 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 238 | 272 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 203 | 237 | IPR002885 | - | |
| Prci6g2393 | 595 | Pfam | PPR repeat | 269 | 298 | IPR002885 | - | |
| Prci6g2393 | 595 | Pfam | PPR repeat family | 202 | 251 | IPR002885 | - | |
| Prci6g2393 | 595 | Pfam | PPR repeat family | 375 | 424 | IPR002885 | - | |
| Prci6g2393 | 595 | Pfam | PPR repeat family | 305 | 353 | IPR002885 | - | |
| Prci6g2393 | 595 | Gene3D | Tetratricopeptide repeat domain | 28 | 195 | IPR011990 | GO:0005515 | |
| Prci6g2393 | 595 | Gene3D | Tetratricopeptide repeat domain | 196 | 261 | IPR011990 | GO:0005515 | |
| Prci6g2393 | 595 | Gene3D | Tetratricopeptide repeat domain | 262 | 335 | IPR011990 | GO:0005515 | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 133 | 167 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 481 | 515 | IPR002885 | - | |
| Prci6g2393 | 595 | Pfam | PPR repeat | 172 | 200 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 516 | 550 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 273 | 303 | IPR002885 | - | |
| Prci6g2393 | 595 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 168 | 202 | IPR002885 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci6g2393 | Prci-Chr6 | 35444882 | 35449088 | Dispersed |