Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2383 ATGGGTATGGCTGCAGAGACCCAGTTTCATGTTTTGGCTGTTGATGATAGTCTCATTGACAGAATGCTGATTGAGAGGCTCCTCAAAACCTCATCCTTCCAAGTTACTGCAGTGGATTCTGGAAGCAAGGCTTTAAAATTTCTTGGTTTAAATGCAGATGAACAGAGAAAGGGAGATACAGTCTCTGTTGATGCTGGTAGCCATCAGGATTTAGAAGTGAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTACGATCTACTGAGAAAAATCAAGGAATCTGAGTCTCTCAAGAACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCGACAGATGCTTAGAAGAAGGAGCTCAAGAATTTTTTCTGAAACCTGTTCAACAGTCAGATGTAAACAAGCTCAAGCCACATTTGATGAAATCAAGAGTTAAGGAAGAGGAAGACCAATTCATCAATAACCAAAGGAAGAGCATGCAAGAAGAAACCCATTAG 513 0.4113 MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKFLGLNADEQRKGDTVSVDAGSHQDLEVNLIITDYCMPGMTGYDLLRKIKESESLKNIPVVIMSSENVPSRIDRCLEEGAQEFFLKPVQQSDVNKLKPHLMKSRVKEEEDQFINNQRKSMQEETH 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2383 170 SMART REC_2 9 145 IPR001789 GO:0000160
Prci6g2383 170 CDD REC_typeA_ARR 11 141 - -
Prci6g2383 170 Gene3D - 10 169 - -
Prci6g2383 170 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 159 IPR045279 GO:0009736
Prci6g2383 170 MobiDBLite consensus disorder prediction 150 170 - -
Prci6g2383 170 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Prci6g2383 170 SUPERFAMILY CheY-like 8 154 IPR011006 -
Prci6g2383 170 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2383 Prci-Chr6 34719224 34720399 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci6g2383 Response_reg 1.7e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2383 6 34719224 34720399 Prci7g1286 7 29167671 29171308 CCT