Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2263 ATGATGGGATCGACAAAACCAATTATTAGAGTTCCTGAATTTCCGATCATCTTCTTCATAGTTGTTCTGATCATCAGTTTCATCAGAACGAGTACTTCTCAAGCACCAATCTACGTTGGAGATGACTGCCATAACAAAACCCAGCAAGTTCTTACATCTTCATACAAAGCTAACCTTAACCAGCTTCTCTCATCGCTCGCCACCGACGCAGCCACAAGCAAAGGCTACAACCATACGGCCGTCGGCACCGCCACCAGCGCTGTCTACGGCCTCTATGACTGCCGCGGTGATGATGCCGGATACTTCTGCCAGTTCTGTATCACCACTGCCAGTAGAGAGGTTCTCCAACGTTGTCCCAATCAATCTTCCGCTGTAATATGGTACGACTTCTGCATCCTCCGATACTCTAACAAGAACTTCTTTGGGAACGTGACAACTAGCCCATCGTGGCATGTCGTCGGAGCAAAGACGGTGTCAGATCCGTTAGAGGGGAAGAAGGCGGAGAGTTTCATGAGAAGTCTAATACAAACAGCGACAGAAGACCCAGAGGAATTGGGTGCTAGAGGAGAGTTTGATTTGGGTGGAGGAAGAAAAAGGTATGCATTGGTTCAGTGTAGCAGAGACCTTAACACTGAAGGTTGCAGACAATGCTTGGAGGCTATGCTGGATAAGGTTCCTCAGTGTTGTGAGCACAAGCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTGATTAAGTACGACGATTTCATGTTTTATCAATCAACCACTTCCTCTAATTCTAATTCTTCTACAGCCCATAATGGTGCTAGGAAGTCAAAAGCCTTGATCATAATCATAACTGTATCAGTGGCCATGGCTATATTAATTTTGTCTCTGTTGATCTTTTGGTGGAGGAAGACTAGAAATGATAATATGCCGTTGGAGAACACTCCTATATTTTACGGCCTTTCTGAAAGAGAGACTTCACTGAACTCAGACCTTCCCACAATCCCTTTAGTTGTGATTCAACAAAGTACGCATCAATTTTCAGAAGCATTTAAATTGGGAGAAGGTGGTTTTGGTCCCGTTTATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTGAAAAGACTTTCAAAAACTTCAGGTCAAGGTTCAAAGGAGTTCAAAAACGAAGTGATATTCATAGCAAAATTACAACATAGAAACCTTGTGAGACTCTTGGGCTGTTGTATAGAGGAAAATGAAAAGCTACTTATATATGAGTACCTGTCTAATTCTAGCCTTGATTTCCACCTTTTCAATGATGAAGAGAATAGGAAGAAACTAGATTGGAAACGCAGACTGAATATTATTAATGGGGTTGCAAGAGGACTTTCATATCTTCATGAAGACTCTCGACTTAGAGTAATTCACAGAGATTTGAAAGCTAGTAATGTTCTTTTGGACAATGAGATGAATCCTAAAATATCAGATTTTGGACTAGCAAGAGCTTTTGATGGAGGCCAAAATCAAGGAATAAATACAGGCCGAGTAATGGGTACTTATGGATATATGGCCCCAGAATATGCTATGGAAGGATTATTTTCAGTAAAATCAGATGTTTTTAGCTTTGGGGTTCTTCTACTTGAAATCATATGTGGAAAAAGGGTGAGATCTTTCCACTTCTCTCAACATCGTCAAAGCCTTCTAATTTACACTTGGAGTCTATGGTGTGATGGAAAATGCTTGGAACTGATGGACCCAATTCTGAAAGATTCATACGTAGAAAGCGAAGTTTTCAAATGCATACACATTGGCTTGCTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACAATGTCTGGTGTTGTAGTTATGCTTGCAAGTGACACAATGACCTTTCCCAAGCCTAATCATCCTGCATTTTCACTAGGAGGAATGGGCCCAGAAGATTCATCTACATCAAAAAATTCCGAAGATGATCCTTCAGTTAATAAGGTGACAATGTCTAACGTCACAGCTAGGTGA 1992 0.4167 MMGSTKPIIRVPEFPIIFFIVVLIISFIRTSTSQAPIYVGDDCHNKTQQVLTSSYKANLNQLLSSLATDAATSKGYNHTAVGTATSAVYGLYDCRGDDAGYFCQFCITTASREVLQRCPNQSSAVIWYDFCILRYSNKNFFGNVTTSPSWHVVGAKTVSDPLEGKKAESFMRSLIQTATEDPEELGARGEFDLGGGRKRYALVQCSRDLNTEGCRQCLEAMLDKVPQCCEHKLGWQVLAPSCLIKYDDFMFYQSTTSSNSNSSTAHNGARKSKALIIIITVSVAMAILILSLLIFWWRKTRNDNMPLENTPIFYGLSERETSLNSDLPTIPLVVIQQSTHQFSEAFKLGEGGFGPVYKGTLPDGREIAVKRLSKTSGQGSKEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLIYEYLSNSSLDFHLFNDEENRKKLDWKRRLNIINGVARGLSYLHEDSRLRVIHRDLKASNVLLDNEMNPKISDFGLARAFDGGQNQGINTGRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKRVRSFHFSQHRQSLLIYTWSLWCDGKCLELMDPILKDSYVESEVFKCIHIGLLCVQEDAKDRPTMSGVVVMLASDTMTFPKPNHPAFSLGGMGPEDSSTSKNSEDDPSVNKVTMSNVTAR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2263 663 Gene3D - 157 251 IPR038408 -
Prci6g2263 663 Gene3D - 38 140 IPR038408 -
Prci6g2263 663 SUPERFAMILY Protein kinase-like (PK-like) 325 615 IPR011009 -
Prci6g2263 663 Pfam Domain of unknown function (DUF3403) 617 663 IPR021820 GO:0004674
Prci6g2263 663 ProSiteProfiles Protein kinase domain profile. 342 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2263 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Prci6g2263 663 MobiDBLite consensus disorder prediction 626 663 - -
Prci6g2263 663 ProSiteProfiles Gnk2-homologous domain profile. 37 140 IPR002902 -
Prci6g2263 663 FunFam Cysteine-rich receptor-like protein kinase 28 39 139 - -
Prci6g2263 663 SMART serkin_6 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2263 663 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 314 417 - -
Prci6g2263 663 Pfam Salt stress response/antifungal 167 247 IPR002902 -
Prci6g2263 663 Pfam Salt stress response/antifungal 43 137 IPR002902 -
Prci6g2263 663 Pfam Protein tyrosine and serine/threonine kinase 347 612 IPR001245 GO:0004672|GO:0006468
Prci6g2263 663 MobiDBLite consensus disorder prediction 636 663 - -
Prci6g2263 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 659 - -
Prci6g2263 663 CDD STKc_IRAK 348 615 - -
Prci6g2263 663 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Prci6g2263 663 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 418 623 - -
Prci6g2263 663 Gene3D Transferase(Phosphotransferase) domain 1 418 623 - -
Prci6g2263 663 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2263 Prci-Chr6 32839437 32847984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2263 22 655 Receptor kinase-like Gene Family AT4G05200 40.957 6.53e-170 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2263 PK_Tyr_Ser-Thr 4.9e-47 CL0016