Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2262 ATGATGGGATCGACAAAACCAATTATTAGAGTTCCTGAATTTCCGATCATCTTCTTCATAGTTGTTCTGATCATCAGTTTCATCAGAACGAGTACTTCTCAAGCACCAATCTACGTTGGAGATGACTGCCATAACAAAACCCAGCAAGTTCTTACATCTTCATACAAAGCTAACCTTAACCAGCTTCTCTCATCGCTCGCCACCGACGCAGCCACAAGCAAAGGCTACAACCATACGGCCGTCGGCACCGCCACCAGCGCTGTCTACGGCCTCTATGACTGCCGCGGTGATGATGCCGGATACTTCTGCCAGTTCTGTATCACCACTGCCAGTAGAGAGGTTCTCCAACGTTGTCCCAATCAATCTTCCGCTGTAATATGGTACGACTTCTGCATCCTCCGATACTCTAACAAGAACTTCTTTGGGAACGTGACAACTAGCCCATCGTGGCATGTCGTCGGAGCAAAGACGGTGTCAGATCCGTTAGAGGGGAAGAAGGCGGAGAGTTTCATGAGAAGTCTAATACAAACAGCGACAGAAGACCCAGAGGAATTGGGTGCTAGAGGAGAGTTTGATTTGGGTGGAGGAAGAAAAAGGTATGCATTGGTTCAGTGTAGCAGAGACCTTAACACTGAAGGTTGCAGACAATGCTTGGAGGCTATGCTGGATAAGGTTCCTCAGTGTTGTGAGCACAAGCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTGATTAAGTACGACGATTTCATGTTTTATCAATCAACCACTTCCTCTAATTCTAATTCTTCTACAGATAATATGCCGTTGGAGAACACTCCTATATTTTACGGCCTTTCTGAAAGAGAGACTTCACTGAACTCAGACCTTCCCACAATCCCTTTAGTTGTGATTCAACAAAGTACGCATCAATTTTCAGAAGCATTTAAATTGGGAGAAGGTGGTTTTGGTCCCGTTTATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTGAAAAGACTTTCAAAAACTTCAGGTCAAGGTTCAAAGGAGTTCAAAAACGAAGTGATATTCATAGCAAAATTACAACATAGAAACCTTGTGAGACTCTTGGGCTGTTGTATAGAGGAAAATGAAAAGCTACTTATATATGAGTACCTGTCTAATTCTAGCCTTGATTTCCACCTTTTCAATGATGAAGAGAATAGGAAGAAACTAGATTGGAAACGCAGACTGAATATTATTAATGGGGTTGCAAGAGGACTTTCATATCTTCATGAAGACTCTCGACTTAGAGTAATTCACAGAGATTTGAAAGCTAGTAATGTTCTTTTGGACAATGAGATGAATCCTAAAATATCAGATTTTGGACTAGCAAGAGCTTTTGATGGAGGCCAAAATCAAGGAATAAATACAGGCCGAGTAATGGGTACTTATGGATATATGGCCCCAGAATATGCTATGGAAGGATTATTTTCAGTAAAATCAGATGTTTTTAGCTTTGGGGTTCTTCTACTTGAAATCATATGTGGAAAAAGGGTGAGATCTTTCCACTTCTCTCAACATCGTCAAAGCCTTCTAATTTACACTTGGAGTCTATGGTGTGATGGAAAATGCTTGGAACTGATGGACCCAATTCTGAAAGATTCATACGTAGAAAGCGAAGTTTTCAAATGCATACACATTGGCTTGCTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACAATGTCTGGTGTTGTAGTTATGCTTGCAAGTGACACAATGACCTTTCCCAAGCCTAATCATCCTGCATTTTCACTAGGAGGAATGGGCCCAGAAGATTCATCTACATCAAAAAATTCCGAAGATGATCCTTCAGTTAATAAGGTGACAATGTCTAACGTCACAGCTAGGTGA 1878 0.4185 MMGSTKPIIRVPEFPIIFFIVVLIISFIRTSTSQAPIYVGDDCHNKTQQVLTSSYKANLNQLLSSLATDAATSKGYNHTAVGTATSAVYGLYDCRGDDAGYFCQFCITTASREVLQRCPNQSSAVIWYDFCILRYSNKNFFGNVTTSPSWHVVGAKTVSDPLEGKKAESFMRSLIQTATEDPEELGARGEFDLGGGRKRYALVQCSRDLNTEGCRQCLEAMLDKVPQCCEHKLGWQVLAPSCLIKYDDFMFYQSTTSSNSNSSTDNMPLENTPIFYGLSERETSLNSDLPTIPLVVIQQSTHQFSEAFKLGEGGFGPVYKGTLPDGREIAVKRLSKTSGQGSKEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLIYEYLSNSSLDFHLFNDEENRKKLDWKRRLNIINGVARGLSYLHEDSRLRVIHRDLKASNVLLDNEMNPKISDFGLARAFDGGQNQGINTGRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKRVRSFHFSQHRQSLLIYTWSLWCDGKCLELMDPILKDSYVESEVFKCIHIGLLCVQEDAKDRPTMSGVVVMLASDTMTFPKPNHPAFSLGGMGPEDSSTSKNSEDDPSVNKVTMSNVTAR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2262 625 SUPERFAMILY Protein kinase-like (PK-like) 287 577 IPR011009 -
Prci6g2262 625 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 276 379 - -
Prci6g2262 625 Gene3D Phosphorylase Kinase; domain 1 277 379 - -
Prci6g2262 625 FunFam Cysteine-rich receptor-like protein kinase 28 39 139 - -
Prci6g2262 625 Pfam Salt stress response/antifungal 43 137 IPR002902 -
Prci6g2262 625 Pfam Salt stress response/antifungal 167 247 IPR002902 -
Prci6g2262 625 ProSiteProfiles Gnk2-homologous domain profile. 37 140 IPR002902 -
Prci6g2262 625 CDD STKc_IRAK 310 577 - -
Prci6g2262 625 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 621 - -
Prci6g2262 625 Pfam Domain of unknown function (DUF3403) 579 625 IPR021820 GO:0004674
Prci6g2262 625 MobiDBLite consensus disorder prediction 588 625 - -
Prci6g2262 625 Gene3D Transferase(Phosphotransferase) domain 1 380 585 - -
Prci6g2262 625 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 380 585 - -
Prci6g2262 625 Gene3D - 157 251 IPR038408 -
Prci6g2262 625 Gene3D - 38 140 IPR038408 -
Prci6g2262 625 ProSiteProfiles Protein kinase domain profile. 304 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2262 625 Pfam Protein tyrosine and serine/threonine kinase 309 574 IPR001245 GO:0004672|GO:0006468
Prci6g2262 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Prci6g2262 625 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
Prci6g2262 625 MobiDBLite consensus disorder prediction 598 625 - -
Prci6g2262 625 SMART serkin_6 304 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2262 Prci-Chr6 32839436 32847984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2262 22 617 Receptor kinase-like Gene Family AT4G05200 40.813 1.89e-163 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2262 PK_Tyr_Ser-Thr 4.3e-47 CL0016