Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2145 ATGCAAGCAGATGAAGATATTGGAAAAATAGCACTAGCAGTGCCTGTTTTAGTCTCAAAAGCTCTCGAGCTATTTTTACAAGATCTTTGTGACCATACTTATGATATAACTCTTCGTAGAGGAGCAAAGACCATGAGTGCATTGCATTTGAAGCATTGTGTACAAAGCTACAATGTTTTTGATTTTCTGAGGGATGTCGTGAGCAGGGTTCCTGACTATAGTCAAGGGTGTGGGCATGGTCATTCTGAATCTGGTGCTGATGATCGGGTTGTTTCAAAGAGAAGCAGGAAAGCTGCTGGTTATAATCACAGCGACAGTGATGAGGAATCTAAGAGGAGCAAGATGCATGAGTTGAACCACACAGGCAATACTGGAAGGGGAAGGGGAAGAGGTCGAGGTAGGGGAAGAGGTCGAGGTAGGGGCGCTCGAATTGTCGAAAGAGATAACTATCATCAGGAGGTTGAACCTGAGCCTTGCACCTTTTTTCAACAGAGCATCAAACATAATCCAAACACAAGTGTGATAGAGGAAAATGGTTCAGCTTATCCAAAAAAAGAAGAAAATGGTTCAGAGTTAAAGGAGTCACGGAAGGAAAATACTGTAGTTCCTGGTGAAGAAGGATCTCAGTCTCTCACTAATGTTGATTTGAACTCCAAAACTAATGAAAATGTAGGCAAAAATGCTGGCACAACTGCTCATGCCTCAGAGCCTGAACCTGCAACTGAGACCGAGCATGAAGATATCCCTGGCTGGTCCATTTCTGACATCGACAAGATGGCCATTGACTCTATGCAGCTTGTGCAGCTTGGTAGACGATTAGAAGAGGAAGAGGAAGATTATGATGAGGAAGGGTAA 855 0.4351 MQADEDIGKIALAVPVLVSKALELFLQDLCDHTYDITLRRGAKTMSALHLKHCVQSYNVFDFLRDVVSRVPDYSQGCGHGHSESGADDRVVSKRSRKAAGYNHSDSDEESKRSKMHELNHTGNTGRGRGRGRGRGRGRGRGARIVERDNYHQEVEPEPCTFFQQSIKHNPNTSVIEENGSAYPKKEENGSELKESRKENTVVPGEEGSQSLTNVDLNSKTNENVGKNAGTTAHASEPEPATETEHEDIPGWSISDIDKMAIDSMQLVQLGRRLEEEEEDYDEEG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2145 284 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 113 - -
Prci6g2145 284 MobiDBLite consensus disorder prediction 158 178 - -
Prci6g2145 284 MobiDBLite consensus disorder prediction 202 237 - -
Prci6g2145 284 MobiDBLite consensus disorder prediction 180 201 - -
Prci6g2145 284 MobiDBLite consensus disorder prediction 74 251 - -
Prci6g2145 284 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Prci6g2145 284 Coils Coil 266 284 - -
Prci6g2145 284 SUPERFAMILY Histone-fold 1 70 IPR009072 GO:0046982
Prci6g2145 284 MobiDBLite consensus disorder prediction 82 123 - -
Prci6g2145 284 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
Prci6g2145 284 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2145 Prci-Chr6 28607215 28613884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2145 1 273 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.590 8.47e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci6g2145 CBFD_NFYB_HMF 2.5e-11 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2145 6 28607215 28613884 Prci6g2145 6 28607215 28613884 ECH