Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2117 ATGGCAGGAGAACCTCAGAGGGTAGTGGTGATAATGGATGCATCAAAAGATGTTTCAGCAAAAGTCATAATGAAGGCCCTCAAAAGGACGTGTCCTCAGGCTGGAGGTGAGCTGACACTCATTGCGGTTCTTGAACAGTTCAGCAGTCCCTTGGGATACAAGATCAGGGTACATGACAGTCCGTTTATTGCAACAAACCAAAAAATTGTTCAAGAGGAATTATCCAAAAAAAGGGAAGACTATAACAATAGTTCGGAAATTGAGAAACTCTCTGACTACTGTGAAATAGCAAAGATGAAATTCCACATTGATGTGGTTGCAAGCCCTTTCATAGAAGTTGCTACTGGTGCTGTCATAAGTTTAGAGGCAACATGGTTGATCGTGGATAGGGATGTGAACAAGGATAGGAAGAAATTGGATCGGTTGCCTTGTGGTATGCTTAGAATAAGAAGTGACAACACCATTGATAAGTTGTGGGATCCGGATGTAACAGACTACTCCAAATCGCATTCCTCAAGTCAAGCTATGAAAATCATTCCTGGAAACCCGGATGAAGAAATTTCGCCCAAGAGGCATAGAACATCACCAAGTGAACAGTTCATATCAACTGGAACATCAAGTTCAAGCATTCTTCAGGAAATTAAAGACAAAGATCAAGGTATAGAACAGGAAACAGCAAAGACAATTTCCATCTCTGACCACCATGAGCAGCGAAGGCGTGATAACAGTGAAGAGTCTCGGATAGAGACAGAATTTACAAACCCACTTTGCTCTGTGTGTAAAAACAAACGACCGAAAGTTGGATGGATAAAAGACTTGAGTTACACAGAACTCTGGAAAGCTACACAGGGATTCTCCCAAAAGAACTTTCTATCAGAGGGTGGATTTGGATCTGTCTACAAAGCAGAGCTCAACGGAATAACCGTTGCCGTTAAGAAACTTAAAAATGCAAGTGTCCAAGGAGAGAAAGAATTCAAATCTGAAGTCAAATTACTTGGCAGAGCAAGGAATGAGAATGTGGTCACGCTTCTGGGGTTCTGCTCAGAAGGAAAGCATAGGCTTCTTGTTTATGAATACATCTGCAACGGTTCACTGGATCAACATTTATCACAACACTCCCGAATTCCTCTTACTTGGGAAGAGAGGATCAAAGTTGCCATTGGAGTTTCAAAGGGCTTGCAATACTTGCATGAGAATAACATTATACACAGAGATGTGAGACCAAACAATATTCTTATAACACATGATCGTCAAGCCCTGCTGGGAGACTTTGGTCTGGCAAGAAATCAACATGGAGATTCCATACAGTCAACAGAGGTGATCGGAACTTTGGGGTATTTGGCACCTGAATATGCAGAATATGGGAAAGTGTCAGCCAAGGTAGATGTTTATTCTTTTGGGGTGGTTCTGCTAGAACTCATCACAGGAATGAGGACAACAGACAAAAGGCTTAAAGGGAAAAGTCTTGTAGGATGGGCGAGACCACTACTAAAAGACAGGAAATATCATGATCTAATTGATGAAAGGATAGTCAATTCCCATGATTTCCATCAACTATTTTGGATGGTTCGAATAGCAGAAAAATGTCTGACTAGGGATCCTCAGAAAAGACTCAATATGTTTGCGGTGGTGAATGCTTTAAGTCGTATATTGGAAGGCAACACCTGCATCATACCAAGAGACTATTCCCCAACAAGGTCAGAGTCATCTTATAGCTCATCAAACTCTGATGAATCAGAAGATGAAGATCAGGAAGGCTTTGGATCAGAAAGTGGGTTAGAAAGCCAGAGCACAAATTCTTCATGGAGTATGAGCTTGGATATGATGAGCCAGAGTATTGGAAGACTCCCACCATCGCCACCAATTGTGAGAACTTGTTGA 1881 0.4168 MAGEPQRVVVIMDASKDVSAKVIMKALKRTCPQAGGELTLIAVLEQFSSPLGYKIRVHDSPFIATNQKIVQEELSKKREDYNNSSEIEKLSDYCEIAKMKFHIDVVASPFIEVATGAVISLEATWLIVDRDVNKDRKKLDRLPCGMLRIRSDNTIDKLWDPDVTDYSKSHSSSQAMKIIPGNPDEEISPKRHRTSPSEQFISTGTSSSSILQEIKDKDQGIEQETAKTISISDHHEQRRRDNSEESRIETEFTNPLCSVCKNKRPKVGWIKDLSYTELWKATQGFSQKNFLSEGGFGSVYKAELNGITVAVKKLKNASVQGEKEFKSEVKLLGRARNENVVTLLGFCSEGKHRLLVYEYICNGSLDQHLSQHSRIPLTWEERIKVAIGVSKGLQYLHENNIIHRDVRPNNILITHDRQALLGDFGLARNQHGDSIQSTEVIGTLGYLAPEYAEYGKVSAKVDVYSFGVVLLELITGMRTTDKRLKGKSLVGWARPLLKDRKYHDLIDERIVNSHDFHQLFWMVRIAEKCLTRDPQKRLNMFAVVNALSRILEGNTCIIPRDYSPTRSESSYSSSNSDESEDEDQEGFGSESGLESQSTNSSWSMSLDMMSQSIGRLPPSPPIVRTC 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2117 626 Pfam Protein tyrosine and serine/threonine kinase 288 546 IPR001245 GO:0004672|GO:0006468
Prci6g2117 626 ProSitePatterns Tyrosine protein kinases specific active-site signature. 401 413 IPR008266 GO:0004672|GO:0006468
Prci6g2117 626 PANTHER OS01G0253100 PROTEIN 182 551 - -
Prci6g2117 626 Gene3D Transferase(Phosphotransferase) domain 1 360 560 - -
Prci6g2117 626 ProSiteProfiles Protein kinase domain profile. 285 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2117 626 MobiDBLite consensus disorder prediction 607 626 - -
Prci6g2117 626 Gene3D Phosphorylase Kinase; domain 1 257 359 - -
Prci6g2117 626 MobiDBLite consensus disorder prediction 215 248 - -
Prci6g2117 626 SUPERFAMILY Protein kinase-like (PK-like) 270 572 IPR011009 -
Prci6g2117 626 MobiDBLite consensus disorder prediction 562 601 - -
Prci6g2117 626 MobiDBLite consensus disorder prediction 194 214 - -
Prci6g2117 626 FunFam Proline-rich receptor-like protein kinase PERK8 247 359 - -
Prci6g2117 626 MobiDBLite consensus disorder prediction 166 248 - -
Prci6g2117 626 SMART tyrkin_6 285 547 IPR020635 GO:0004713|GO:0006468
Prci6g2117 626 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 360 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2117 Prci-Chr6 28126689 28131259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2117 273 602 Trihelix Transcription Factor Family AT5G38560 42.450 2.42e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci6g2117 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g0904 7 26218414 26224338 Prci6g2117 6 28126689 28131259 CCT