Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1976 ATGTCCTCCACTGCTTCAGATTATTCTTCCAGTGTTCACCTTCCTCCATATGTGGTGGAGGACTGCCGCGGCGTCCTTCAAGTTTACAGCGACGGTTCCATCGTACGCTCTTCAAAGCCAAGCTTCAACGTCCCTGTCCACGACGACGGCTCTGTTCTATGGAAAGATGTCGTTTTCGATCCTACCCATGACCTTCAGCTTCGACTCTATAAGCCCGCTGATTCGTCTTCATCCTCCAAACTTCCGATTTTCTACTATATCCATGGCGGTGGCTTCTGCATCGGCTCCTTTACCTGGCCCAACTTTCACAACTACTGCCTCCGACTCGCTTCAGATCTCCGAGCCGTCGTCATATCGCCGGACTATCGGCTGGCTCCGGAGAACCGGCTCCCAGCCGCTGTGGATGACGCATTCACGGCTGTCAAGTGGCTCCAGGCACAAGCCACGAACAATGATCCGGATCCATGGCTGAGCGAAGTGGCTGATTTCAATCGGGTGTTCATTTCAGGTGACTCGGCCGGCGGAGACATCGCTCACCATCTGGCGCTTGGGCTTGGGCGTGGGTCGCCCGAGTTAGCGCCGGTTCGGGTCAGAGGTTACATTCTTTTGGCACCCTTCTTTAGCGGCACCGCCCGAACCCGATTGGAGGCTGAAGGTCCAAAAGACGCTTTCCTCAATTTAGAGCTCATTGACAGATTTTGGAGGCTTTCTGTACCGATTGGAGATGACAGAGATCATCCCCTTGTGAATCCATTTGGGCCACGGAGCAAGAGCCTTGAAGGCATTGATTTGGATCCAATACTAGTGGTGGTTGGAGGAAGCGATTTGCTGAGAGATAGGTGTGAGGACTATGCAAGTAGCCTTAAGAAATTGGGGAAGAACATAGAGTATGCAGAATTTGAAGGGAAGCAACATGGATTCTTCACTATTGATCCTAGTTCAGAAGCTGCAAAGAAGCTGATGCTAATGATCAAACAATTTGTAGAGAAACATTCACTCTGA 1002 0.512 MSSTASDYSSSVHLPPYVVEDCRGVLQVYSDGSIVRSSKPSFNVPVHDDGSVLWKDVVFDPTHDLQLRLYKPADSSSSSKLPIFYYIHGGGFCIGSFTWPNFHNYCLRLASDLRAVVISPDYRLAPENRLPAAVDDAFTAVKWLQAQATNNDPDPWLSEVADFNRVFISGDSAGGDIAHHLALGLGRGSPELAPVRVRGYILLAPFFSGTARTRLEAEGPKDAFLNLELIDRFWRLSVPIGDDRDHPLVNPFGPRSKSLEGIDLDPILVVVGGSDLLRDRCEDYASSLKKLGKNIEYAEFEGKQHGFFTIDPSSEAAKKLMLMIKQFVEKHSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1976 333 Pfam alpha/beta hydrolase fold 85 308 IPR013094 GO:0016787
Prci6g1976 333 SUPERFAMILY alpha/beta-Hydrolases 11 331 IPR029058 -
Prci6g1976 333 Gene3D alpha/beta hydrolase 26 332 IPR029058 -
Prci6g1976 333 PANTHER ARYLACETAMIDE DEACETYLASE 22 312 - -
Prci6g1976 333 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 166 178 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1976 Prci-Chr6 19316687 19318107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1976 3 327 Carbohydrate Esterase AT1G68620 36.364 7.63e-58 188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g0934 7 26403958 26409392 Prci6g1976 6 19316687 19318107 CCT
Prci6g1976 6 19316687 19318107 Prci6g1976 6 19316687 19318107 ECH