Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1896 ATGGCGATGGCTAAAAAACTTTTCCATTTTCGTCATTTCTTCCTCGTCGTCGTCTTCACCTTCTTTCTCGCCATCCACCGTACACATCAGTTACATAATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTATCCATCAGCTCTAAGAAGCTTGAGAACTACGAAAGATTTCTGCAACGTCGAGTCGACCAACTGTTTGACGATAGTCTGCTATGAAGACAATGTAACACAGCTTCATGTTGTTGGTGACAATGGGGTTTCTTATTTGCCTCAAGATTTCACTTCAGACTCTCTATTTGCCACTTTGGGTGCACTCTCGAGCTTGAAAGTTCTTTCTCTGGTTTCTATGGGTCTCTGGGGTCCTATACCTGAAAGCATTTCTCAACTGCCTTCTCTGGAGATTCTTAACATTAGCTCAAATCATTTCAGTGGAGCCATCCCAATCCAGCTTTCTCTGCTGAAGAGTCTGCAATCATTGGTTCTTGATGATAACCACTTTACAGGTACAATTCCCATGTGGGTAGGTTCGCTTCAAGGTTTAGCTGTGTTGAGTATGGGAAAAAATTCTCTTAGTGGCTCTGTGCCAACTTCTGTTAACGATCTTCAAACTCTGAGGGTGCTGGATCTATCAAATAATGATTTACATGGTGAACTACCTGGCCTTAGTAGCTTGAAAAATCTACAAGTTCTTAATTTGGAAAACAACACATTTGGACCCCATTTTCCATCTCTACACACCAAGTTAGTTTCACTTGTACTTAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCTCTTCCTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGATTTGTGGGACCATTTCTACCATCTTTACTCTCTTTGCCTTCCATCAAATACCTTGATGTTTCGGCAAATAAACTTACTGGAACGCTGTTCAGTAATTATTCTTGCAATTCTGATATCCTTTTTGTGAATCTATCTTCAAATCTCTTAAAAGGGGAGCTTCCCAGTTGTTTGAAACCAGAGAACAAGGTGGTTGCATTGTATGACAGAAATTGTTTCTCAAATGAGGATCAAGATCAGCATCCTCCTACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTTATGCCCCATGAACAAAAGCAGAGAAGAAGAACAGCTAGTAAAACAGTTCTTGTGTCAAGCATGGGAGGTATCGTTGGAGGATTCTTGGTTTTTGGAGTGGTTTTCTTGGTTATTGTACGGGTAAACAAAAAAGGATCTGGGAAAGCACCTGCAGGGTCTAAATTGGAGCTAGTTAAAAGCCAGATGAATGACAAACATGATGAGGTTAAAACAACAAGAACTGCACTTTCAGTATTGGAGAATATCATCAGCCGAGTTCCTACGCCTAATAAGGAATTTGTGAAAACGCTTGCAAGATCCATGATGGAGCATGTTGTTAGCCGGGTTCATCACAGACATGTGAGACCTGCAAGGTCCATAGTAGAGCATGTCTCTTCAGTAAACACCGCAAAACTGCTCAGCGATGCAAGGTATATCTCACAGACAATGAAGATGGGTGCCAGCCTTTCTGCTTATAGGACCTTCGCTTTGGATGAACTCAAGGAGGCTACAAATAATTTTGATGCATCATGTTTCATAAGTGAAGGTGCATGTGGTCAGATCTACAAAGGATTGCTCTCTGATGGAACTCATATTGCTGTCAGAAGCTTGAAAATGAAGAAAAGGCATGGCCCTCTGACATATATGCATCACATTGAGTTGATTTCTAAACTTAGGCATCCACACTTGGTCAGTGCTCTAGGACATTGCTTCGAGTGCAGCCATGATGATCCAAGTGTCAGCAATATATATATCATATTTGAGTTTGTACCATACAGAAGTTTACGAGGCTGCATATCTGGATCTTCTGGGGAAAAGCTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGTGTTATTAGAGGCATTCAATTTTTGCACACTGGGATGGTGCCTGGACTGTATTCAAATAATCTGAAGATAACAGATATTCTACTGGATAACAATCTCAATGTTAAAATATGCACCTACAATCTTCCTCTATTGACTGATAATAAGATAATGGTAGGCAATGGAACTTTTTCCCCAGTAGTTAAAGGAAATGTTCAAGCAAGGATGAAGGATGGTGAAAAGAATGATGTCTATGATTTTGGCGTAATCTTACTTGAAATCATTCTAGGACGCACAATCATGTTCCATAATGAAGTTGGAACACTAAAAGATCTTTTACAAGTAAGCCTAGCAACTGATGATATAGCTAGAAGGAGCATTGTTGATCCAGCAGTTCACAAGCAATGCTCAGATGAATCATTGAAGAGATTGATGGAGATATGTGTGAGGTGTGTCTCAGAAAATCCTACTGATAGGCCTTCTGTGGAAGATGCTCTCTGGAATTTGCAGTTTGCAGCACAGGTTCAGAATTCATGGGGAAGAGACTCCATTGATGCTAGAGAATCACCTGCTTCACCTTCCCTAGAATAA 2538 0.4078 MAMAKKLFHFRHFFLVVVFTFFLAIHRTHQLHNSQSYALLKFQKLLGYPSALRSLRTTKDFCNVESTNCLTIVCYEDNVTQLHVVGDNGVSYLPQDFTSDSLFATLGALSSLKVLSLVSMGLWGPIPESISQLPSLEILNISSNHFSGAIPIQLSLLKSLQSLVLDDNHFTGTIPMWVGSLQGLAVLSMGKNSLSGSVPTSVNDLQTLRVLDLSNNDLHGELPGLSSLKNLQVLNLENNTFGPHFPSLHTKLVSLVLRNNSFRFGIPSNLSSSYQLQKLDLSLNGFVGPFLPSLLSLPSIKYLDVSANKLTGTLFSNYSCNSDILFVNLSSNLLKGELPSCLKPENKVVALYDRNCFSNEDQDQHPPTFCQTEALAVNVMPHEQKQRRRTASKTVLVSSMGGIVGGFLVFGVVFLVIVRVNKKGSGKAPAGSKLELVKSQMNDKHDEVKTTRTALSVLENIISRVPTPNKEFVKTLARSMMEHVVSRVHHRHVRPARSIVEHVSSVNTAKLLSDARYISQTMKMGASLSAYRTFALDELKEATNNFDASCFISEGACGQIYKGLLSDGTHIAVRSLKMKKRHGPLTYMHHIELISKLRHPHLVSALGHCFECSHDDPSVSNIYIIFEFVPYRSLRGCISGSSGEKLSWAQRIAAAIGVIRGIQFLHTGMVPGLYSNNLKITDILLDNNLNVKICTYNLPLLTDNKIMVGNGTFSPVVKGNVQARMKDGEKNDVYDFGVILLEIILGRTIMFHNEVGTLKDLLQVSLATDDIARRSIVDPAVHKQCSDESLKRLMEICVRCVSENPTDRPSVEDALWNLQFAAQVQNSWGRDSIDARESPASPSLE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1896 845 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515
Prci6g1896 845 Gene3D Transferase(Phosphotransferase) domain 1 630 836 - -
Prci6g1896 845 SUPERFAMILY RNI-like 96 348 - -
Prci6g1896 845 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 629 834 - -
Prci6g1896 845 SUPERFAMILY Protein kinase-like (PK-like) 526 820 IPR011009 -
Prci6g1896 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 45 827 - -
Prci6g1896 845 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 250 375 - -
Prci6g1896 845 Gene3D Ribonuclease Inhibitor 32 246 IPR032675 -
Prci6g1896 845 Gene3D Ribonuclease Inhibitor 247 357 IPR032675 -
Prci6g1896 845 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Prci6g1896 845 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 151 245 - -
Prci6g1896 845 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 520 628 - -
Prci6g1896 845 Gene3D Phosphorylase Kinase; domain 1 506 616 - -
Prci6g1896 845 Pfam Protein tyrosine and serine/threonine kinase 552 813 IPR001245 GO:0004672|GO:0006468
Prci6g1896 845 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1896 Prci-Chr6 17316073 17321789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1896 48 844 Miscellaneous Gene Families AT3G03770 40.370 1.40e-161 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci6g1896 PK_Tyr_Ser-Thr 9.3e-20 CL0016