Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1230 ATGGCTACCACCAATGCCTTCCTCTCCACTCCGTCCAAAACTCCATCAGACAAATCTGCTTCGTCCAGGAAGTATGCTCACTCGAACTCTCATGATTCTTCCGTTACTCGATCGTCCTCCCATTCCGATTTCAAGTCTCGATTCGAGGCCTACAATCGGCTTCAGGCTGCTGCCGTGGCCTTTGGTGAGAAGCTCCCGATACCTGAGATCGTTGCACTTGGCGGCCAGTCCGATGGCAAGAGTTCTCTCCTTGAAGCGCTGCTTGGGTTCCGATTCAATGTGCGCGAGGTCGAGATGGGTACTCGCAGGCCCCTCATTCTCCAAATGGTTCACGACCCCACCGCTCTGGAGCCTCGTTGCCGTTTTCAGGAGGAGGATTCGGAAGAGTATGGAAGCACTGTCGTTTCGGCATCTACCATAGCAGACATTATAAAGTCTCGCACAGACGCACTTTTGAAGAAAACTAAGACGTCAGTATCTCCTAAACCGATTGTAATGAGGGCAGAATATGCTCACTGCCCAAACCTTACTATCATCGATACCCCCGGCTTTGTTCTTAAAGCAAAGAAGGGAGAACCGGAGAACACACCTGATGAAATTCTTTCAATGGTGAAAGCGTTGGCCAGTCCTCCCCATCGCATCCTCTTGTTCCTTCAGCAAAGCAGCGTTGAGTGGTGCTCATCCTTGTGGTTGGATGCCATTCGCGACATTGATCCGACATTTAGACGGACGGTGATTGTTGTATCCAAATTTGATAATCGTCTTAAGGAATTCAGTGATCGATGGGAAGTGGATCGTTACTTAAGTGCAAGCGGTTACCTTGGAGATAGCACTCGCCCTTTCTTTGTGGCCCTACCAAAAGATAGAGGAACTGTTTCAAATGATGAATTCCGCAGGCAGATTTCTCAGGTAGACTCAGAGGTTCTGCGTCATTTGCGTGAAGGTGTCAAGGGAGGATTCGATGAAGAAAAGTTTAGACCCAATATTGGTTTTGGCTGTCTGAGAGATTATTTGGAGGCTGAGCTTCAGAAGAAATACAAAGATGCTGCACCAGCAACTCTAGCATTGCTTGAACAGCGCTGCAGCGAAGTCACTACTGAACTTGCTAGAATGGACTCGAAAATTAAGGCCACTTCAGATATTGCACATCTTAGGAAATCCGCTATGCTATATGCAGCTTCTATCAGCAATCATGTAGGTGCGTTGATTGATGGCGCAGCTGATCCTTCCCCTGAACAATGGGGGAAAACAACAGCAGAAGAGCAATCTCAAAGTGGTATTGGGGTTTGGCCTGGGGTCATAGCAGATATAAGACCCCCAAATGCTACACTTCGTCTCTATGGAGGAGCTGCTTTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCCAGTGTCAAGGGAAAAGGTTGCGAATATATTACTTGCTCATGCTGGGCGAGGTGGGGGAAGAGGTGTAACAGAGGCTGCTGCAGAGATTGCTCGTTCTGCTGCTAAATCATGGCTTTCACCTCTTCTTGACACTGCTTGTGATAGGCTTGCTTTTGTTTTGGGAAGTTTATTTGATTTGGCTCTAGAAAGAAATCGCAGTCATGACTCAGAATATGGGGGTGAAACAGGAAATATGAACGGTTATGTTGGTTTTCATGCTGCTTTAAGGCATGCTTACAGTCGGTTCATAAGGGATCTAGCTAAGCAGTGCAAGCAACTAGTCAGACACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTATGTTAATGACTTCCAACTAAGTAATGGCCTAAATGCTACCTCTTTTAGGCAGGCTTCTGCTGCTTCCTTTTTCTTTGAGTTGAGTGATACAGAGTCAGCTTCCCGCAATGTAACGAGTGATCAGGAAAATATACCCCCAGAAAAGAATGGACAGGAAACAACACCAGGTAAAACTGCAGATGCTAGAGAAGCTTTGCGAGAAAGCCAGATGACTATCCCCGAGACTCCATCTCCTGATCAACCAGGTGATCCTGTCTATATTGGGGCAAAAAAGGAACTTGGAAATTGCAATGATTTTGGACCAAGAAAAAGAATGTCAAGAATGACAGGAAATAACAAAAATTCTGATAGTCTGAGATTGCAGAACGGTGGCCTTCTATTGGGAAATGGGGAAAAGTCAGGTTCCGCGTACTCAGAAATATGTTTATCAGCGGCACAGCATTTTGCACGCATACGTGAAGTGCTTGTTGAGAGAGGCGTGGCATCAACGTTAAATTCTGGATTTCTCACCCCCTGTCGGGAACGGCTTGTGGTGGCTCTTGGGTTAGATTTGTTTGCTGTGAATGATGAGAAATTCATGGACATGTTTGTGGCTCCTGGTGCCATAGATTTACTTCAGAATGAACAAGAGTCTCTCCTGAAGCGTCAAAAAATACTTCAATCTTGTTTGAATGAATTCAAAAATGTTGCTCGGGCCATTTGA 2481 0.4619 MATTNAFLSTPSKTPSDKSASSRKYAHSNSHDSSVTRSSSHSDFKSRFEAYNRLQAAAVAFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDPTALEPRCRFQEEDSEEYGSTVVSASTIADIIKSRTDALLKKTKTSVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKALASPPHRILLFLQQSSVEWCSSLWLDAIRDIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDSTRPFFVALPKDRGTVSNDEFRRQISQVDSEVLRHLREGVKGGFDEEKFRPNIGFGCLRDYLEAELQKKYKDAAPATLALLEQRCSEVTTELARMDSKIKATSDIAHLRKSAMLYAASISNHVGALIDGAADPSPEQWGKTTAEEQSQSGIGVWPGVIADIRPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVTEAAAEIARSAAKSWLSPLLDTACDRLAFVLGSLFDLALERNRSHDSEYGGETGNMNGYVGFHAALRHAYSRFIRDLAKQCKQLVRHHLDSVTSPYSQVCYVNDFQLSNGLNATSFRQASAASFFFELSDTESASRNVTSDQENIPPEKNGQETTPGKTADAREALRESQMTIPETPSPDQPGDPVYIGAKKELGNCNDFGPRKRMSRMTGNNKNSDSLRLQNGGLLLGNGEKSGSAYSEICLSAAQHFARIREVLVERGVASTLNSGFLTPCRERLVVALGLDLFAVNDEKFMDMFVAPGAIDLLQNEQESLLKRQKILQSCLNEFKNVARAI 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1230 826 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 64 351 IPR030381 GO:0005525
Prci6g1230 826 PANTHER DYNAMIN 49 820 IPR022812 -
Prci6g1230 826 Pfam Dynamin family 70 250 IPR045063 -
Prci6g1230 826 Coils Coil 354 374 - -
Prci6g1230 826 FunFam Dynamin-related protein 5A 36 402 - -
Prci6g1230 826 CDD DLP_1 65 351 IPR001401 GO:0003924|GO:0005525
Prci6g1230 826 PRINTS Dynamin signature 92 109 IPR022812 -
Prci6g1230 826 PRINTS Dynamin signature 170 187 IPR022812 -
Prci6g1230 826 PRINTS Dynamin signature 67 85 IPR022812 -
Prci6g1230 826 PRINTS Dynamin signature 239 255 IPR022812 -
Prci6g1230 826 SMART dynamin_3 44 287 IPR001401 GO:0003924|GO:0005525
Prci6g1230 826 Gene3D - 34 399 IPR027417 -
Prci6g1230 826 MobiDBLite consensus disorder prediction 627 676 - -
Prci6g1230 826 MobiDBLite consensus disorder prediction 627 649 - -
Prci6g1230 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 358 IPR027417 -
Prci6g1230 826 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1230 Prci-Chr6 8928101 8933161 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1230 6 8928101 8933161 Prci6g1230 6 8928101 8933161 ECH