Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0456 ATGAGCGACAGAAGGCCTGATCCGCATGTAGCGCAGCAAATTCGGCGTGACAGGTTGAGAATCCAGAATAGTTCCCAGCATTTAGAAGATTTCCCAAGCAATATTGAACACTTATCGTTACGTCCAGGGATCAGTCCTGATCTTCTTCAAGTTAGGAGTGTGAGGAATGCCAGTATGCTTTACGAACCTGCTTTTTATTCATCGGAGATGGTCAATTTTTCAACGGTTACGAATCCTTTAGCTGAATCGAGTGGGCTAACAACGCCTCAGTTTGCTTCATTCCCCTGTTCATCAAATCCAGCTTCGTCCAGCTTTCATTCTGCTCTCGAAGAGCAATGCGGAATACGTAACTTTGGCTATTGGAGAAACAGTGGGTCACCCCAAGTCTGTGATTGGATGCCTAACTATGCCTCTAGTTCGGCGACTAACGAGAGCAATCCTAATCCTAATTCCACTTTTGGCGTGGGAATCAATAATGAATTATCAGCTGTACAGTTTTCTCTGAACAATCCGTCATCAGGTGAAACGGCGACTCGAGAAAGCCAAAGGCAATTAGGGGAAATTCATCCGAACGCAATGCAGGATGTAATCAAGTCAGCTTCTATCAGGGGGCGAGGGTCAGAAATGGCTTCGCTGACGCAACAAAGTGGCCATGGAATGTGGGTGGAAAACGGAAATCAACTCTTTTTTCTTCCAAACTATGGAATCCAATCAAATCAGTTGCGTCTTGGAAATCCTGATTCTTGCACTAATCGAACGATCGATGGTTCTCTCGGTTTTAAAGCTAGTGATGAGTGCTCAGGTCCTCGAGTGAGCGGCTCCAATAATCAGGGCTTATCTTTATCACTTTCTTCGAATTCACAGTCTACGCCTTGCAGATCGGATGACCATCAATCGCGATATGTCCTTTCTAAGGATCCTCAATACTCAAAACCTGTGAGATCTGTTTCAAATACCTCATTTAGTGCTGGAGACCGTGTCAAATCGCTTCAAAACATGGTGGCCGGAATACCTTCTTCGAACATTGATTATCGAAACGTGGGGCCTCTCGGCCCTTTCACGGGGTATGCTACCATATTGAAGAACTCGAATTTCTTAAAGCCAGCGCAGCAGTTGTTGGAAGAAATCTGTGCTCAACACTCTGAAAAACTTACGAAAGGACCTGATGTTTCTGGGAGGGTTTCTGGAGAAGTTGGTGGTTCTTCTACTTCTGCGGACGCTGTCAATGCAAAAAATGAAAGTGTTGTTAGCGCGAAGGTTATCAGTTCGGGTGGTTCGTCCTCCATGTTTTATTGTTCGATTGGAAATGAAAGTAATGGTGATGGTGGAACCAGGAGTAGCTCTCGCATTTCTTCTCGGCCACAATATCAACAGAGAATGGCCAAGTTCCTGTACATGCAAGAGGAGGTTATCAAAAGATACAAGCAACATAATCAGCTAATGCAGACGGTTGTTTCATCCTTTGAGTCAGTCGCGGGTCTTAGTTCTGCTACTCCTTACATTTCCAAGGCTCTCAAGACAGTATCAAGACACTTCAGATTCCTAGAAAATGCTATCTCCGGTCAAGTTGAGCATATAAGAGATGTTTTGGGAGAGGAATTATCAGCTCCTGCCAGTGGTGGTGTTACTTCCACCACCAGTGGTAAACTTGACAGCAATATGGCACGACTGAAATTCCTGGACCAAAGCTTTCAAAAGAACAAATTGATTGTGGGTGGTGCAGGCTATCTTGAACACCAACAGCACGCATGGAGGCCCCAGCAGAAGGGCTTGCCAGAACGTGCGGTGTCAATTCTTAGAGCTTGGTTGTTTGATCATTTTCTTCACCCGTACCCCACGGACGCTGATAAACACATGCTTGCTGCTCGAACAGGTCTATCTCGAAACCAGGTATCAAACTGGTTCATAAACGCCCGAGTACGTGTTTGGAAGCCAATGGTGGAGGAAATACACATGCTTGAAACGAAAGGGTTGACGAGCGAGAACGATCTGAAGAACGCTAATAAAAAGGAGGGAAGTTCTGCCATTGAAGGTGCGCACGAGTCAAGAAGAGATCAATGTTTGAGCAGCAATCAATTCCGGGGTCTTGAAATAGGCGCCGGAGACAGGCATGTGGATGAGATGGTGGAATTAGATGGGGAAGGATGGAACCAAGAGAAGCGATCGAAGCTGGAATGTCACATGACGCCAAGCTTGGACGGCACGTTAATGGGTTTTGTGCCTTACAGAAGGGGTGGGGTCGAGGTTGGGGGAGTTGGACCGGTGTCCCTAACTCTGGGTCTCAGACACGACGACGTTGAAGCATTACAGCAACACCGCCATTTTGGAGGCCATGTCATCAACGACTTTGTTGGCTAA 2358 0.4631 MSDRRPDPHVAQQIRRDRLRIQNSSQHLEDFPSNIEHLSLRPGISPDLLQVRSVRNASMLYEPAFYSSEMVNFSTVTNPLAESSGLTTPQFASFPCSSNPASSSFHSALEEQCGIRNFGYWRNSGSPQVCDWMPNYASSSATNESNPNPNSTFGVGINNELSAVQFSLNNPSSGETATRESQRQLGEIHPNAMQDVIKSASIRGRGSEMASLTQQSGHGMWVENGNQLFFLPNYGIQSNQLRLGNPDSCTNRTIDGSLGFKASDECSGPRVSGSNNQGLSLSLSSNSQSTPCRSDDHQSRYVLSKDPQYSKPVRSVSNTSFSAGDRVKSLQNMVAGIPSSNIDYRNVGPLGPFTGYATILKNSNFLKPAQQLLEEICAQHSEKLTKGPDVSGRVSGEVGGSSTSADAVNAKNESVVSAKVISSGGSSSMFYCSIGNESNGDGGTRSSSRISSRPQYQQRMAKFLYMQEEVIKRYKQHNQLMQTVVSSFESVAGLSSATPYISKALKTVSRHFRFLENAISGQVEHIRDVLGEELSAPASGGVTSTTSGKLDSNMARLKFLDQSFQKNKLIVGGAGYLEHQQHAWRPQQKGLPERAVSILRAWLFDHFLHPYPTDADKHMLAARTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGLTSENDLKNANKKEGSSAIEGAHESRRDQCLSSNQFRGLEIGAGDRHVDEMVELDGEGWNQEKRSKLECHMTPSLDGTLMGFVPYRRGGVEVGGVGPVSLTLGLRHDDVEALQQHRHFGGHVINDFVG 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0456 785 MobiDBLite consensus disorder prediction 385 405 - -
Prci6g0456 785 FunFam BEL1-like homeodomain protein 9 588 650 - -
Prci6g0456 785 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 249 670 - -
Prci6g0456 785 Pfam Associated with HOX 359 520 IPR006563 -
Prci6g0456 785 SUPERFAMILY Homeodomain-like 591 651 IPR009057 -
Prci6g0456 785 Gene3D - 588 650 - -
Prci6g0456 785 SMART HOX_1 585 649 IPR001356 GO:0003677
Prci6g0456 785 MobiDBLite consensus disorder prediction 263 320 - -
Prci6g0456 785 Pfam Homeobox KN domain 602 641 IPR008422 GO:0003677|GO:0006355
Prci6g0456 785 SMART prehox3 354 521 IPR006563 -
Prci6g0456 785 ProSiteProfiles 'Homeobox' domain profile. 604 645 IPR001356 GO:0003677
Prci6g0456 785 MobiDBLite consensus disorder prediction 268 297 - -
Prci6g0456 785 CDD homeodomain 584 646 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0456 Prci-Chr6 2964737 2970052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0456 342 769 Homeobox Transcription Factor Family AT4G34610 36.807 9.19e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci6g0456 POX 5.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0456 - - pcin:129312762 1498.03