Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0365 ATGGATCCTTCAAGTGGACAACACCAGCAAATGCCTAGCCAGTCCTTGGAGAATATGTTGGCTTGTCCAAAGGCACAGAATCAAGAGAGAAAGCCAAGACCTCAGCCAGAACAGGCCCTGAAGTGTCCAAGATGCGACTCTACCAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCCCAGCCAAGATATTTCTGCAAGTCTTGCAGGAGATATTGGACAAAAGGAGGAACTCTGAGGAATGTTCCAGTGGGCGGAGGCTGCAGGAAGAACAAAAGGTCCTCGTCATCTTCGTCGTCGTCATCAAAAAGAGCTCAGGATCAATCAGTCACACCCAATTCCAACCCACTCATCACCCCCCTCCCTCCATTATCATATGACCCCAATGAACTCACTCTTGCAATGGCTAGACTCCAAAAACAATCTTGCGGGCAATTGGGCTTTGGTGACCATGATTTTTCCGTTATGGGAAATTCCCTTGGAAACCTGTCTTCCACAAACATTGGATTTCTGGATGCACTTCGTAGTGGATTCCTTGAAACACAGGGTAATAGTCTCCAGGATCTGTACTACGGATATGGAAATGGGGACTCGGGAGAGGTGGATAATGGCAATAATAGTAATGCTTGTGGGATTGCTGGGGTTAGTGGAGAGATTATGCTTCCATTTGATCAAGAAGTGAGTAATGCCACTACTCAAGCAGTCACTGTCACTACCATGAAGCAGGAAATGTGCAATGGCAGAGAACAAGGTGACACCAAGGTTTTGTGGGGTCTTCCATGGCAGCTTAATGGAGACACGAATATGGGTGAAATTGATTCAGGAAGAGCAAATTGGAACAGTCTCACTTCGTCTTGGCACGGGCTTCTTAATAGTCCCCTAATGTAA 891 0.4613 MDPSSGQHQQMPSQSLENMLACPKAQNQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSSSKRAQDQSVTPNSNPLITPLPPLSYDPNELTLAMARLQKQSCGQLGFGDHDFSVMGNSLGNLSSTNIGFLDALRSGFLETQGNSLQDLYYGYGNGDSGEVDNGNNSNACGIAGVSGEIMLPFDQEVSNATTQAVTVTTMKQEMCNGREQGDTKVLWGLPWQLNGDTNMGEIDSGRANWNSLTSSWHGLLNSPLM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0365 296 MobiDBLite consensus disorder prediction 84 124 - -
Prci6g0365 296 MobiDBLite consensus disorder prediction 91 116 - -
Prci6g0365 296 MobiDBLite consensus disorder prediction 1 22 - -
Prci6g0365 296 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Prci6g0365 296 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Prci6g0365 296 MobiDBLite consensus disorder prediction 1 41 - -
Prci6g0365 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 196 IPR045174 GO:0003700|GO:0006355
Prci6g0365 296 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0365 Prci-Chr6 2292250 2294627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0365 38 296 C2C2-Dof Transcription Factor Family AT2G28510 43.165 3.45e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci6g0365 zf-Dof 6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0365 - - gmx:100799737 440.654