Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2271 ATGGGTACGCTTCAGACTTGGAGAAAAGCTTATGGTGCCATCAAAGATACAACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTACGCGGATTTGGAGGTTGCCATAGTCAAAGCCACGAACCACGTTGAATGCCCTCCCAAGGAGAGACACCTTAGAAAAATTCTATTTGCCACGTCTGCTATTCGACCCCGAGCTGATGTTGCTTACTGCATTCATGCACTTGCCCGTCGATTGGCCAAGACACGAAATTGGACGGTGGCACTAAAAACACTGGTAGTCATCCATAGGCTATTAAGAGAGGGCGATCCTACTTTCAAGGAAGAATTTCTGAATTTCTCACAAAGAGGGCGCATTCTCCAACTTTCTAATTTTAAGGATGACTCTAGCCCAATTGCTTGGGATTGCTCTGCCTGGGTACGCACTTATGCATTGTTTTTGGAAGAGAGGCTTGAATGTTTTCGGATTTTGAAGTATGATATTGAAGCTGAACGTCTTCCCAAGCCTGCCCAAGGGCAGGAGAAGCAGGGTTACAGCAGGACAAGGGATCTAGATAGTGAAGAACTATTAGAGCAGTTGCCTGCTTTGCAGCAGCTTCTCTATCGACTTATTGGCTGCAAGCCAGAAGGAGCAGCTGTTAGCAATTATGTGATACAATATGCTCTAGCTCTGGTACTGAAAGAGAGCTTTAAGATTTATTGTGCTGTTAATGATGGAATCATCAATCTTGTTGATAAGTTTTTCGAGATGCCGAGACATGAAGCTGTCAAAGCCCTTGATATCTATAAACGTGCTGGCCAGCAGGCAGCAAATTTATCTGATTTCTATGAAGTATGCAGAGGTTTGGAACTTGCTAGGAATTTTCAGTTTCCTGTCCTAAGAGAGCCTCCTCAATCTTTTCTGACAACCATGGATGAGTACATAAGAGAGGCTCCACGAGTGGTGACAGTGCCTACTGAGCCATTGCTTCAGTTGACATACAGACCGGAGGAAGAAGTTCTAACAACTGAAGACAGTAAAGTATCTGTTGAAGAGGAGGAGCCATCAGTTCCTGCGGATGATGTTGTCTCCAATTCTGATATTGTTCCTCCTCCGCCACTTCCATCTCAGAATAATTTTGACACTGGAGACTTACTGGGTTTGAATGACACTCTACCTGATGCATCATCAATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTACCCACTGAAAATGGCGCAACATCAGGTTTTGAATCTAATACCACCCAAGCGAACGATTTTGATCCAACTGGATGGGAGCTTGCTTTGGTTTCCACTCCGAGTAGCAATATTTCTTCAGTCAATGAAAGGCAGTTGGCTGGTGGAATGGACTCGCTCACTCTTAACAGCTTATATGACGAAGCAGCATACAGATCGCAGCAGCCAGTGTATGGAGCACCGGCTCCAAATCCATTTGAGGTGCAAGATCCATTTGCTTTCTCAAGCAGCATCCCTCCTCCTCCTGCTGTCCAAATGGCAGCGATGGCTCAGCAGCAAGCAAATCCATTTGGTCCATACCAGCCTTATCAGCCTCAGCCACAGCCGCAGCAGCAGCAGCATCTGTTGACGAGCCCTGCAAATCCTTTTGGGGATGCAGGATATGGGGCGTTTCCTGTGAATCCTGTTTCTCACTCACAAAATAACAACAATCCATTTGGTAACCCGGGCTTGCTATGA 1701 0.4586 MGTLQTWRKAYGAIKDTTKVGLAHVNSDYADLEVAIVKATNHVECPPKERHLRKILFATSAIRPRADVAYCIHALARRLAKTRNWTVALKTLVVIHRLLREGDPTFKEEFLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPAQGQEKQGYSRTRDLDSEELLEQLPALQQLLYRLIGCKPEGAAVSNYVIQYALALVLKESFKIYCAVNDGIINLVDKFFEMPRHEAVKALDIYKRAGQQAANLSDFYEVCRGLELARNFQFPVLREPPQSFLTTMDEYIREAPRVVTVPTEPLLQLTYRPEEEVLTTEDSKVSVEEEEPSVPADDVVSNSDIVPPPPLPSQNNFDTGDLLGLNDTLPDASSIEERNALALAIVPTENGATSGFESNTTQANDFDPTGWELALVSTPSSNISSVNERQLAGGMDSLTLNSLYDEAAYRSQQPVYGAPAPNPFEVQDPFAFSSSIPPPPAVQMAAMAQQQANPFGPYQPYQPQPQPQQQQHLLTSPANPFGDAGYGAFPVNPVSHSQNNNNPFGNPGLL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2271 566 Gene3D ANTH domain 173 325 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Prci5g2271 566 MobiDBLite consensus disorder prediction 331 347 - -
Prci5g2271 566 SMART enth_2 30 161 IPR013809 -
Prci5g2271 566 FunFam Putative clathrin assembly protein 174 322 - -
Prci5g2271 566 MobiDBLite consensus disorder prediction 509 566 - -
Prci5g2271 566 MobiDBLite consensus disorder prediction 331 366 - -
Prci5g2271 566 FunFam Clathrin assembly protein AP180 6 161 - -
Prci5g2271 566 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 506 IPR045192 GO:0048268|GO:0072583
Prci5g2271 566 Pfam ANTH domain 31 310 IPR011417 GO:0005543
Prci5g2271 566 SUPERFAMILY GAT-like domain 179 310 - -
Prci5g2271 566 CDD ANTH_N 32 154 - -
Prci5g2271 566 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Prci5g2271 566 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Prci5g2271 566 Gene3D - 6 161 IPR008942 -
Prci5g2271 566 MobiDBLite consensus disorder prediction 548 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2271 Prci-Chr5 39685753 39690995 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2271 5 39685753 39690995 Prci5g2271 5 39685753 39690995 ECH