Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1436 ATGACGGAGGTTAAAGACCCGGCGATTAAGCTCTTTGGCAGGACGATTTCTCTCCCGCCCAACCGCCATGCCTCCCCTTTTCATCATTCCTCTCACCATCATACTCCTCCTTCTCCCCGCCCTCAGGAGTTGTCAAGGAATGAACTCACCTCAGTACAAGATGATGATGCCTCCTATCAAAGCACAGAGGAGTTAAAATCTTCCTCTGCATCTTCAGGCGTTTTTGAGAATCCTAAGACCCCCTCAGCAGAAAGAGAGACATCTTTAGTCAAATCTACTAAACATGGAGAACAAAGTGAGACAAGCAATTTAGAAGAAAAAACTCCCAAAAAACCTGACAAGATACTTCCATGCCCAAGATGCAATAGCATGGACACCAAATTCTGTTATTTTAACAACTACAATGTGAATCAGCCGCGTCATTTCTGTAAGAACTGTCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTAGGGGCAGGTCGTCGCAAGAACAAAAACTCTTCTGCCTCACAGTATCGTCAAATAATGGTTCCAAAGACCCTTCAGATTGCCAAAGACGAATCTGCCAATGGATTGTACAATAGAGCAGCTGTCTTGACCTTTGGCTCAGATTCTCCTCTTTGTGATTCCATGGTTTCTGTGTTAAACCTTGCAGAGAAAACGCAGAATGGTGTTGTAAATGGGTTTCATTTACGCGATCGAAATAACTTTGTTGATAATGAGAATGATCAATCCGTTGGAGCTTCTGGTACAGCTTCAACTTGTACGGAGAGGAAAGGCAATGCTACGTTGCTGGAACCTGTAAATAATATTCGTCCAGGTTTCTCATGGCCTTGTCAATGGAACTCATCACAGTGGAGTTCTTCAATCCCGCAAGGTTATCCGGCATCATTCTGTCCCAATGCTATATATTGGGGTTGTACTTTGCCAGCTTCTTGGAATATACCATCCATCTCTGCACAATCATCTTCTGTTAACCAATCAACCCCTAGCTCACCATCTCTGGGAAAACACTCGAGGGAAGGGAACATTATCAATCCAGTCAACTCGCCAAAAGAAAATCCTAATGTGGAGAGTGGCAGTTCAGAAAATAGTGTCTTGATTCCCAAGACTCTACGAGTTGGTGATCCCAGTGAAGCTGCAAAGAGTTCTATATGGTCAGCATTAGGGATGAAGAATGAGAATGAAGGAGGGTTTTTCAAGGCATTTCCTGCAAAGAAGGATGACAAGAAACATATGGTTGAACCATCACTGGTGTTGCAAGCCAACCCAGCAGCTTTATCACGATCTCGTACTTTCCATGAGCAGATTTAA 1326 0.4389 MTEVKDPAIKLFGRTISLPPNRHASPFHHSSHHHTPPSPRPQELSRNELTSVQDDDASYQSTEELKSSSASSGVFENPKTPSAERETSLVKSTKHGEQSETSNLEEKTPKKPDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSASQYRQIMVPKTLQIAKDESANGLYNRAAVLTFGSDSPLCDSMVSVLNLAEKTQNGVVNGFHLRDRNNFVDNENDQSVGASGTASTCTERKGNATLLEPVNNIRPGFSWPCQWNSSQWSSSIPQGYPASFCPNAIYWGCTLPASWNIPSISAQSSSVNQSTPSSPSLGKHSREGNIINPVNSPKENPNVESGSSENSVLIPKTLRVGDPSEAAKSSIWSALGMKNENEGGFFKAFPAKKDDKKHMVEPSLVLQANPAALSRSRTFHEQI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1436 441 MobiDBLite consensus disorder prediction 1 117 - -
Prci5g1436 441 PANTHER CYCLIC DOF FACTOR 2 2 440 IPR045174 GO:0003700|GO:0006355
Prci5g1436 441 Pfam Dof domain, zinc finger 113 170 IPR003851 GO:0003677|GO:0006355
Prci5g1436 441 MobiDBLite consensus disorder prediction 325 372 - -
Prci5g1436 441 ProSitePatterns Zinc finger Dof-type signature. 118 154 IPR003851 GO:0003677|GO:0006355
Prci5g1436 441 ProSiteProfiles Zinc finger Dof-type profile. 116 170 IPR003851 GO:0003677|GO:0006355
Prci5g1436 441 MobiDBLite consensus disorder prediction 37 87 - -
Prci5g1436 441 MobiDBLite consensus disorder prediction 88 114 - -
Prci5g1436 441 MobiDBLite consensus disorder prediction 325 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1436 Prci-Chr5 33622305 33625570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1436 1 441 C2C2-Dof Transcription Factor Family AT3G47500 40.966 2.06e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci5g1436 zf-Dof 5.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1436 - - lang:109358999 449.514