Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1231 ATGGCCGATAACACAGACGATATAGCGGAGGAAATCTCGTTTCAGAACTTTGACGATGACTGTAGATTGCTCGGCAATATGCTCAACGACGTTTTGCAGCGAGAAGTTGGAAGTATGTTCATGGAGAAACTGGAAAAAATTCGAGTTCTTGCTCAGAGTGCTTGTAATATGAGGCAGGCAGGGATTGAGGGCATGGCCGAACTGGTCGAGAAGCAGTTGGCTTCAGAGTTATCGGAGATGACGTTAGAAGATGCTCTGATTCTCGCCCGTGCCTTCAGTCATTATCTTACTTTGACGGGCATAGCCGAAACCCATCACAGGGTTCGTAAAGGACGGAATGTGCCGAATTTATCAAAATCTTGTGATGACACCTTTAACCAGCTGGTGCAGAGTGGAGTTTCCCCTGACGAGCTTTATAACACAGTCTGCAAGCAGGAGGTTGAAATTGTTCTCACAGCCCATCCCACACAAATCAATCGCCGTACTTTACAGTACAAACACATTAGAATTGCTCATCTTTTGGATCTTAATGATCGACCTGATCTTAGTTTTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGGGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGTGAAAAACCCACACCAGTTGATGAGGCTAGGGCTGGTTTGAATATTGTGGAGCAGTCACTATGGAAAGCCGTGCCTCATTACTTACGTCGTGTTAGCAATGCTTTAAAGAAGCATACAGGAAAACCACTTCCATTAACTTGTACTCCTATAAAGTTTGGATCTTGGATGGGGGGTGATAGAGATGGAAATCCAAACGTGACAGCACAGGTCACAAAAGATGTTACACTTTTATCAAAATGGATGGTGATTGATCTCTATTTTCGCGAAGTCGATAACCTTAGATTCGAGCTGTCTATGAATCGGTGCAGTGATGAGTTGTTAAGGCTACACATAAACTTCCCAGAAGCTCTCTCTGAGGATCGCCATGAGGATTGGACATCTATGAATAGAAGTCAATTCAAACATTATGGTCAACAAGCTCCACTTCCAACACAACTTCCAGCTAAAGCTCATTTACCCTCCTGTGCTGAAAATGGTGAATCTCAGTATCCTAGACTGGATATTCCAGGAAAAGATTACATGCCGCCGAATCATGAGGATGGTGATATCTCTTCTAGTTCTACAACATTCAAGAGCGACAACCATAACAGTCATGCATCACCAAGTTCAGAATATTTGAGCACTTCTCAAGTGCCAACAAATCTACGCACTAGTCAACCACATACTCCAAGGAAATTTTATGCTGACTCCCAAACAGGAAGGTCCAGTTTTCAGAAGCTTTTGGAGCCAAAGCTCCCTCAGCTTCCTGGAATTGCTCCTTACAGGGTTGTCCTTGGGAATGTAAAAGATAAGCTTCTAAAAAGTCGTAGACGGTTGGAGCTTCTTCTTGAGGATAATCCATGTGACTATGATCCTTCAAGTTATTATGAAACAACTGACCAACTTTTGGAGCCTTTGCTCCTGTGTTACGAATCTCTGCAATCATGTGGATCTGGGGTGTTAGCTGATGGTCGACTAGCTGACCTGATCCGAAGAGTTGCTACCTTTGGAATGGTGTTGATGAAGCTTGACTTGCGTCAGGAATCTGGTAGACATGCTGAGACACTTGATGCAATTACCCAATATTTGGATATGGGAATTTTTAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACTCGAGAACTGAAAGGGAAGAGGCCACTGGTTCCTTCCAGCATAGAAGTTACTCCTGATGTTAGAGAAGTCTTGGATACCTTCAGAATTGCAGCTGAGCTAGGGAGTGATTCACTTGGAGCCTATGTGATTTCAATGGCTTCAAATGCGAGTGATGTTCTTGCAGTGGAGCTTTTACAGAAAGATGCACGGCTTGCTGTTAGTGGGGAGCTGGGAAGAGCATGTCCTGGTGGAACGCTGCGGGTTGTTCCACTATTTGAAACTGTGAAGGATCTGAGAGGAGCTGGTTCAGTTATTCGAAAACTTTTGTCAATTGATTGGTATCGTGAACACATCATTAAGAACCATAATGGCCATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGGCGATTCACTGCTGCTTGGGAACTTTACAAGGCTCAGGAGGACGTCGTAGCTGCTTGCAATGAGTATGGCATTAAAGTTACTCTGTTCCATGGCCGTGGAGGGAGTATTGGTCGTGGTGGAGGCCCCACATATATGGCTATTCAGTCCCAGCCACCTGGCTCTGTGATGGGCACCCTTCGTTCTACAGAGCAGGGAGAGATGGTGCAGAATAAGTTTGGATTGCCACAGATAGCTGTGAGACAGCTTGAGATATACACAACAGCCGTGCTGCTTGCAACCCTTCGTCCACCTCTCCATCCCCGTAAAGAAAAATGGCGTAATCTCATGGAAGATATCTCAAAAATTAGCTGCCAATATTACCGAAGTGTAGTATATGAGAATCCAGAATTCCTTGCCTACTTCCATGAAGCCACACCTGAAGCAGAGCTTGGCTTCCTTAACATAGGAAGTCGCCCCACAAGAAGAAAGAGCACGAAAGGAATTGGACATCTTCGCGCCATACCGTGGGTGTTTGCGTGGACCCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGTGCTTGTGAGGAAGGACACACAGAAGAGCTACAAGCCATGTACAAAGAGTGGCCTTTCTTTCAATGTGCATTAGACCTTATAGAGATGGTTCTGGGGAAAGCAGACATTCCTATAGCCAAGCACTATGATGAAGTCCTTGTGTCAGAAAAGAGGCAAGAACTTGGCCGTGAACTAAGGGAGGAGCTCAAAACAACAGAGAAGTTTGTACTGGTTGTTAGTGGACACGAGAAACTTCAGGAGAACAATAGGATCTTAAGGAGGCTAATTGAGAATAGACTTCCCTTTCTAAACCCCATGAACATGCTGCAGGTGGAGATACTCAAGAGGCTTAGACGTGATGATGACAACCATAAAATCAGAGATGCTTTACTCATCACCATAAATGGGATTGCTGCTGGAATGAGGAATACTGGTTAA 3141 0.4448 MADNTDDIAEEISFQNFDDDCRLLGNMLNDVLQREVGSMFMEKLEKIRVLAQSACNMRQAGIEGMAELVEKQLASELSEMTLEDALILARAFSHYLTLTGIAETHHRVRKGRNVPNLSKSCDDTFNQLVQSGVSPDELYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDLNDRPDLSFEDREMVIEDLVREITSIWQTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAQVTKDVTLLSKWMVIDLYFREVDNLRFELSMNRCSDELLRLHINFPEALSEDRHEDWNXSMNRSQFKHYGQQAPLPTQLPAKAHLPSCAENGESQYPRLDIPGKDYMPPNHEDGDISSSSTTFKSDNHNSHASPSSEYLSTSQVPTNLRTSQPHTPRKFYADSQTGRSSFQKLLEPKLPQLPGIAPYRVVLGNVKDKLLKSRRRLELLLEDNPCDYDPSSYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAITQYLDMGIFSEWDEEKKLDFLTRELKGKRPLVPSSIEVTPDVREVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQNKFGLPQIAVRQLEIYTTAVLLATLRPPLHPRKEKWRNLMEDISKISCQYYRSVVYENPEFLAYFHEATPEAELGFLNIGSRPTRRKSTKGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEEGHTEELQAMYKEWPFFQCALDLIEMVLGKADIPIAKHYDEVLVSEKRQELGRELREELKTTEKFVLVVSGHEKLQENNRILRRLIENRLPFLNPMNMLQVEILKRLRRDDDNHKIRDALLITINGIAAGMRNTG 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1231 1047 Gene3D Phosphoenolpyruvate/pyruvate domain 289 359 - -
Prci5g1231 1047 Gene3D Phosphoenolpyruvate/pyruvate domain 397 541 - -
Prci5g1231 1047 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1047 IPR022805 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Prci5g1231 1047 MobiDBLite consensus disorder prediction 340 443 - -
Prci5g1231 1047 Pfam Phosphoenolpyruvate carboxylase 458 1047 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 Pfam Phosphoenolpyruvate carboxylase 19 325 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1047 IPR015813 GO:0003824
Prci5g1231 1047 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 MobiDBLite consensus disorder prediction 390 443 - -
Prci5g1231 1047 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 705 717 IPR033129 -
Prci5g1231 1047 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1047 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci5g1231 1047 FunFam Phosphoenolpyruvate carboxylase 1 414 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1231 Prci-Chr5 31445248 31454725 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1231 5 31445248 31454725 Prci5g1231 5 31445248 31454725 ECH