Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1229 ATGAATGATCAGGACGCGGCGGCGCCGGTGCCGAGGGTGAGCGTGGTGGTGTTCCTCCTGAAGGGAAGATCTGTACTCCTAGGTCGGCGAAGCTCCTCCGTCGGCAACTCGACTTTTGCTCTTCCCGGCGGCCACCTGGAGTTTGGCGAGAGCTTCGAGGAATGTGCAATCAGAGAAGTGAAGGAGGAGACGGGAATGGAGATCGCGAAAACGGAGTTCATAAAGGTGACGAACAACGTGTTCCTGGACGAAACGAAGCCGTGTCACTACGTGACCATCTTGATGCGAGCCGAACCGGCTGGTGCAGATGAAGAACCGAAGAACATGGAACCAAACAAGTGTGATGGATGGGAGTGGTATGAATGGGGAAATCTTCCGAAACCTCTGTTTGGACCATTGGACAAAATGGTCAACGAAGGTTTCAAGCCATTCCCTCCCTGA 441 0.5397 MNDQDAAAPVPRVSVVVFLLKGRSVLLGRRSSSVGNSTFALPGGHLEFGESFEECAIREVKEETGMEIAKTEFIKVTNNVFLDETKPCHYVTILMRAEPAGADEEPKNMEPNKCDGWEWYEWGNLPKPLFGPLDKMVNEGFKPFPP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1229 146 ProSiteProfiles Nudix hydrolase domain profile. 10 143 IPR000086 -
Prci5g1229 146 PANTHER 8-OXO-DGTP DIPHOSPHATES NUDT15 4 145 - -
Prci5g1229 146 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 4 145 - -
Prci5g1229 146 Pfam NUDIX domain 12 128 IPR000086 -
Prci5g1229 146 FunFam Nucleotide triphosphate diphosphatase NUDT15 2 146 - -
Prci5g1229 146 CDD Nudix_Hydrolase_19 11 135 - -
Prci5g1229 146 ProSitePatterns Nudix box signature. 44 65 IPR020084 GO:0016787
Prci5g1229 146 SUPERFAMILY Nudix 8 137 IPR015797 -
Prci5g1229 146 PRINTS NUDIX hydrolase family signature 39 53 IPR020476 -
Prci5g1229 146 PRINTS NUDIX hydrolase family signature 53 68 IPR020476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1229 Prci-Chr5 31402743 31403615 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1229 5 31402743 31403615 Prci5g1229 5 31402743 31403615 ECH