Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1180 ATGATGGAGTCCCCATCCTTTTCATCCTCCTCCACCTCCGATTCCGGTACCACCGCCACCGGTGATCAGAATGCGGAGCGAAGTCGGAGAAGTGGCGACGCCCATGGAGCTGTGACTTTTGAGCAATCGCGTCGGTGGCATGATGTTTTCTGGTCGGGAATATTTATCATTCATTTGATTTTTCTGGCACTCATTCTGGGGGTTCTCGGTCTCAATAGGTTCAAGAAAAGGGATAGGCTAAATATTGATGTGTACACCGTACCGCTTTTCAAGCGTGAGCATGGGTTGACCGAGGATTACTGGCCGCTTTATGCTGTTGCTGGAGGAGTTGGGACTGTTCTCGGATTGAGTTGGCTGCTGCTGCTGGGTTCTTGTGCAAATCAAATGATGAAGGTTTCTGTTCACATACTGACCACTTATCTTGCTGTGATCAGTGTTTTGTGTTTCTGGGCTGAACAGTTTTTTTGGGGAGTTATTTTTGCCACCGGAGCAGCTTTGCAGTTCTTGTACGTGATATCGGTCATTGACAGACTTCCGTTTACCATGCTGGTTCTGCAAAAAGCTATGAAGATGGTTTGCATTCTTCCTGAGGTTATGAGAGTGGCATATGCATTTATGCTTGTGGTGCTTTTATGGATGGCCTTATGGTCTTTTGGTGCATCAGGCGTTGTGGCTTCAAGCTTGATTGATGTTGGATGCTGGTGGGTTCTTTTGATTTTCTCTGTAAGTCTATTCTGGACAGGTGCTGTACTCTGTAATACTGTACATGTAATAGTGTCTGGGATGGTGTTTCTCAATCTTATCCATGGTGGTAGAGATACAACTTCAGTACCTGCTAACTCCTTAATAAGATCTTTACAATACGCCTTGACGAAATCTTTTGGCAGCATTTGTTATGGCTCATTATTTACTGCTGCTATTAGGACACTTAGGTGGGAGATAAGGGGTTTCCGGTCGAAGATTGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTCCATCTTGTGGAGACTCTTGTCCGATTCTTTAACAAGTATGCCTATGTTCAGATAGCTGTTAATGGTAAAAGCTTTAACCGTTCAGCTAGAGATGCCTGGGAATTACTCCAGTCAACTGGTGTTGAAGCACTCGTAGCTTATGATTGTTCAGGTGCTGTCCTGCTAATGGGCGCTATCTGTGGTGGTTTGATAACCGGAACATGCTCTGGTGTTTGGGCGTGGTACAGATTTGGTGATAGAGATAGAGTATTTATGATTGGAACCACATCTATGTTGATGGGGATGGTCTTGGTTGGAGTGGCAATGGTTGTGGTGGAAAGTGCTGTGACTTCCATATACATATGCTATGCGGAGGACCCCTTATTGATTCGTAGATGGGACACACAGTTTTTCAACCAGATGTCTGAGACATTACACCAGAGACTTCAATACAGGAGTGCTCGAGCAAGGGAAGTTCTAACCCAATCTCAACTTGATTACCGTGTTCGACAAAACGCATCTTTTGATTAA 1515 0.4469 MMESPSFSSSSTSDSGTTATGDQNAERSRRSGDAHGAVTFEQSRRWHDVFWSGIFIIHLIFLALILGVLGLNRFKKRDRLNIDVYTVPLFKREHGLTEDYWPLYAVAGGVGTVLGLSWLLLLGSCANQMMKVSVHILTTYLAVISVLCFWAEQFFWGVIFATGAALQFLYVISVIDRLPFTMLVLQKAMKMVCILPEVMRVAYAFMLVVLLWMALWSFGASGVVASSLIDVGCWWVLLIFSVSLFWTGAVLCNTVHVIVSGMVFLNLIHGGRDTTSVPANSLIRSLQYALTKSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNRSARDAWELLQSTGVEALVAYDCSGAVLLMGAICGGLITGTCSGVWAWYRFGDRDRVFMIGTTSMLMGMVLVGVAMVVVESAVTSIYICYAEDPLLIRRWDTQFFNQMSETLHQRLQYRSARAREVLTQSQLDYRVRQNASFD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1180 504 Pfam Plasma-membrane choline transporter 158 455 IPR007603 GO:0022857|GO:0055085
Prci5g1180 504 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 26 483 IPR007603 GO:0022857|GO:0055085
Prci5g1180 504 MobiDBLite consensus disorder prediction 1 34 - -
Prci5g1180 504 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1180 Prci-Chr5 30778039 30784158 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1180 5 30778039 30784158 Prci5g1180 5 30778039 30784158 ECH