Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1174 ATGCAAAGCTTCAAGACTGCTCAGTCCACCCCACAGCAACTCTATTGCCACCCTTCCTTCTTTCTTCGGGGTGATGATGCCGGCCGAAATCCTGCGCGTTTCTCCGATCTTGGAGAGCTTCATCATTCCGTTTCTCCTTTTCAGCATGAGGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTAAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAGTACGGGACATTGAGCTCGAACATCGGGTCTTCAGAAATTGCTTCAACAGGAGCTGGGTGCCTGGATACAGGGCAGCATCTCATGTATCAGAAGGGAATCGCGGCTGCGCCGGCCGCCGTGCCGGTCGGGAACGGACATATGGAGAATTGGGGTGATTCCGGCATGGTGGATAATAGTCAACACACTGATACTTCCACAGATATCGACCCCGATGATAAAAACCTATGTAATAGAAGTCAGCCTGGGAGAGCCGTGGTTGCGGATTCCATAGATCAATCTAAGGCCAAACCGGAGGATCCGAAGACTCTTCGTAGGCTCGCTCAGAATCGAGAGGCTGCGAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGTCTCAGACTAGCACAACTGGAGCAAGAGCTTCAACGCGCGCGACAGCAGGGAATGCTTGTTGCAGGTGGATTTCCTGGGGATCATGGTCATTCAGTGGTTGGAAATGGTGCCTTGGCATTTGACATGGACTATGCGCGTTGGACCGATGAGCATCAACAACTGATCAATGACCTAAGAACGGCGGTTAATTCTCAAATGGGAGATAATGAACTGCATATTGTTGTTGAGGGTGTTACAGCTCATTATGACGAGTTATTTAGGTTAAAAAGCATAGGGGCAAAGGCTGATGTATTTCACATTCTCTATGGTATGTGGAAGACGCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCGTCTGAACTTTTGAAGATACTGAGGAACCAGCTTGAGCCATTAACAGAGCAGCAATTGATGGGCTTGTATAATTTGCAGCAGTCTTCGTTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCAGATACACTTTCCTCAACCTTCCTCGGACCAACCGGTACTGGAAACGTCGCCGAATACATGAGTCAAATGGCACTTGCTATGAGCAAGCTTGCCACATTGGAGAGTTTCCTCCATCAGGCTGATCTCTTGAGGCAACAAACACTGCAACAGCTGCAAAAAATCCTGACAACGCGACAAGTAGCACGCTCATTCGTTATCGTAAATGACTACATTTCGCGACTGCGAGCACTTAGTTCGTTATGGTTAGCTCGCCCTAGAGAGTAG 1392 0.4799 MQSFKTAQSTPQQLYCHPSFFLRGDDAGRNPARFSDLGELHHSVSPFQHEDAVDLSSSSMFTVKSSNVAVVPINLQYGTLSSNIGSSEIASTGAGCLDTGQHLMYQKGIAAAPAAVPVGNGHMENWGDSGMVDNSQHTDTSTDIDPDDKNLCNRSQPGRAVVADSIDQSKAKPEDPKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGMLVAGGFPGDHGHSVVGNGALAFDMDYARWTDEHQQLINDLRTAVNSQMGDNELHIVVEGVTAHYDELFRLKSIGAKADVFHILYGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLTEQQLMGLYNLQQSSLQAEDALSQGMEALHQSLSDTLSSTFLGPTGTGNVAEYMSQMALAMSKLATLESFLHQADLLRQQTLQQLQKILTTRQVARSFVIVNDYISRLRALSSLWLARPRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1174 463 Pfam bZIP transcription factor 177 215 IPR004827 GO:0003700|GO:0006355
Prci5g1174 463 SUPERFAMILY Leucine zipper domain 177 220 IPR046347 GO:0003700|GO:0006355
Prci5g1174 463 Pfam Seed dormancy control 262 336 IPR025422 GO:0006351|GO:0043565
Prci5g1174 463 PANTHER TRANSCRIPTION FACTOR TGA9 120 463 - -
Prci5g1174 463 MobiDBLite consensus disorder prediction 121 180 - -
Prci5g1174 463 SMART brlzneu 173 226 IPR004827 GO:0003700|GO:0006355
Prci5g1174 463 CDD bZIP_HBP1b-like 177 224 - -
Prci5g1174 463 Gene3D - 176 226 - -
Prci5g1174 463 FunFam BZIP family transcription factor 176 225 - -
Prci5g1174 463 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Prci5g1174 463 Coils Coil 196 223 - -
Prci5g1174 463 ProSiteProfiles DOG1 domain profile. 244 460 IPR025422 GO:0006351|GO:0043565
Prci5g1174 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 219 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1174 Prci-Chr5 30730218 30733602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1174 3 463 bZIP Transcription Factor Family AT1G68640 59.110 5.18e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci5g1174 DOG1 1.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1174 5 30730218 30733602 Prci5g1174 5 30730218 30733602 ECH