Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3177 ATGGAGCCAGGATTGGTTTTGAGCGAAATGCCGGAAATGCATTCCATCGCAGGAGGTAGATTTTTCGGCGCCGGAGGTGGCGGTGTAGACAGGAGGCTCAAACCTCTCCCCAGCGCTCACAACAATGCCAACCATAACCACCAGACGTTGAAGTGCCCGAGGTGCGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAGAATTGCCGTAGATACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCTGTCGGCGGCGGTTCCCGGAAATCTAAGCGCTCCAAACCCAAAAACCCTTACTCAGAAACTTCCTCTGCCGCCGTGACAACGGCACCACCAGCGGAGCGCGAGCGTAAGACGTCGGACTCTCATTCCAGCAGTGAAAAATCCAGTGATTCCAGCCTCGTCGTCCGTTCCAATTCGAAGCCTAGCTTGGAACTAGTCGTCGCTGGAGAGGGAGGAGAATCCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCTTGATCACACCCACGAACGAGACCCTGGCAATTGGATATGGGAATACAATCGACGCTCCATCGTTTCAGCTGCGCAGCCAGTGGCAGGAAGGGACGAACGCGAGCGATAGTCGTCATCAGGACTCGAAGTTTCCGGAGATGATGACGACGGCGACTGGATCGTTGACGGAGCAGACGGTGCAAAATATAATGGGGCACGGAGAACTTGGGCCGTTGGATTGGCAAGGGAGCGCCGATCATCAAGGTTTGTTTGATGTTGCTAACACCGTTGATCAGGGTTTCTGGAGTCACAATCAGTGGAACGAAGACAATTCGGGTCTTTTTCATCTACCTTGA 870 0.5391 MEPGLVLSEMPEMHSIAGGRFFGAGGGGVDRRLKPLPSAHNNANHNHQTLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGSRKSKRSKPKNPYSETSSAAVTTAPPAERERKTSDSHSSSEKSSDSSLVVRSNSKPSLELVVAGEGGESGIFSEIENLTSLITPTNETLAIGYGNTIDAPSFQLRSQWQEGTNASDSRHQDSKFPEMMTTATGSLTEQTVQNIMGHGELGPLDWQGSADHQGLFDVANTVDQGFWSHNQWNEDNSGLFHLP 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3177 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 236 IPR045174 GO:0003700|GO:0006355
Prci4g3177 289 MobiDBLite consensus disorder prediction 91 149 - -
Prci4g3177 289 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
Prci4g3177 289 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Prci4g3177 289 Pfam Dof domain, zinc finger 48 104 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3177 Prci-Chr4 42935961 42938283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3177 30 289 C2C2-Dof Transcription Factor Family AT5G60850 38.567 7.48e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci4g3177 zf-Dof 2.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3177 - - pcin:129308249 536.569