Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2861 ATGGAGTCTTCGGACCACTGGCTTCAGGGAGCTGTTCAAGAGGAATCTGGAGCAATGGATTCTTCATCTTATTCTCCACCATTAATGGAGAGGAGGGTAAGGCCAGCCCCAACGGACCAAGCTTTGAAGTGTCCGAGGTGTGAGTCCACAAACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCGAGGTACTTCTGCAAAACTTGCAGGAGGTACTGGACCAAAGGAGGCACATTGAGAAACATCCCAGTAGGTGGAGGTTGCAGAAAGAACAAGAAAGTCTCGTCCAAGAAATCCAACGACGTCGTTCACCCAGTACTGTCAGAACCCAAAGATCCTCATCTCACAGCTTCTAATTTCCCAGATCATGCAATTAATTTTCCCCACCCAGTGGGACTGATGGTGGAGAATTCGAGGCTCATGGAAACTAAGTTTGGAGGGATAAACAATGTTATGGGAAATTTTGGCGATGCTGGGTTTTCAGATCAGATAAATTGTAGCCACAATGGGTTATTGGCTCAGAATTGCCAGGGTTTTGGAGGAAATATGCGTTACTTTGATGGCTATAACATTAATGGCGAGACTTATAGCACAATGGACTCTTTTTACCATGGCAATGAGGATCAAATTACTGTTGGTGCAATTCATGATGTGAAGCCAAACCCTAAGCTATTGTCTCTTGAATGGCAAGACCAAGGTTGTTCTGATGCTGGGAAGGAGCCTTTTGGGTATATCAACAGTCTCTTGGGCTTCTTTTGA 768 0.4518 MESSDHWLQGAVQEESGAMDSSSYSPPLMERRVRPAPTDQALKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDVVHPVLSEPKDPHLTASNFPDHAINFPHPVGLMVENSRLMETKFGGINNVMGNFGDAGFSDQINCSHNGLLAQNCQGFGGNMRYFDGYNINGETYSTMDSFYHGNEDQITVGAIHDVKPNPKLLSLEWQDQGCSDAGKEPFGYINSLLGFF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2861 255 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Prci4g2861 255 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Prci4g2861 255 Pfam Dof domain, zinc finger 39 96 IPR003851 GO:0003677|GO:0006355
Prci4g2861 255 MobiDBLite consensus disorder prediction 97 111 - -
Prci4g2861 255 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 119 IPR045174 GO:0003700|GO:0006355
Prci4g2861 255 MobiDBLite consensus disorder prediction 1 29 - -
Prci4g2861 255 MobiDBLite consensus disorder prediction 1 23 - -
Prci4g2861 255 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2861 Prci-Chr4 40586159 40587377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2861 19 105 C2C2-Dof Transcription Factor Family AT5G60200 65.517 3.60e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci4g2861 zf-Dof 5.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2861 - - pcin:129309705 483.411