Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1894 ATGGCAGCAGTACCTTCTGAGCTTAGCCTGGATTGCAAACTCCACCATAGCTTTTCCATGCTTCTGATGAAATCCTTTCCAGATCATCACACTGATCAGACTCATCACAACCGCAAGCTCGAAGAATTCGTTTCTCGCCTCCAAGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAACTTCCTCTCTGCATGCAACTTCTCACCAACGCTATGGAGGAGTCAAGGCAGAAACTTGAGGCTTTGAGAGGAAATGAAGACAAGAAAAGTGCAGTTCTGGAAGATTTCATACCGTTAAGGAATTCAAATTCTGAAAGCTCTGAGAAAGCATCGAGCACATGTGATAAGGCAAATTGGATGATATCTGCTCAGCTATGGAGCCAAGCTAATGAAGAAACCAAGCCACAATATTCCACAATTGCATCGCCCAATCATAAAGGTCAATCTGTTCATGATCAGATTGCTGGGTTAACGTTCAATGTTAGCCCTAATAAGCTACACAAAAATATTAGTGGAGGAGCCTTCCTTCCATTCTCAAATGAACGAATTAGCTCGAACCAGTGTCCTTCGTCGACGCCATTGCAGGCTCTTCCGGAGCTGGCACTTACTACTTCTCCTGATGGGAAACAAATAATGGAGGATGAGAAATTATACTCACAGACTGAGAATTCTAGTAAAGGAGGAAGAAGCAGTAATAATGGTGGTGTGGTGAGTGATCAACGAAAAAGGATTATTACAGTTTTGTGTGAGGTAAAAACAACCAGTAAAACTGCTTCAACGACGTCCACCACGCAGAGTCATCGGAAAGCAAGAAGGTGTTGGTCGCCGGACTTACACCGGCGATTTGTGAATGCTCTTCAGATGCTTGGCGGATCTCAAGTGGCCACCCCAAAACAAATTAGGGAGCTGATGAAGGTTGACGGATTGACCAATGATGAAGTTAAAAGTCATCTCCAGGTACTCTCTTCTCTGTCCCCCCACATGCGTGTGTGGGGTTTGAAAAAGGGCGTGCACCATTTTTGCTGTCCGAAATTGATGCTGAAATATCGGCTTCACACAAGACGACCTGGTCAACAGTCACAAGCAGGTGGGGCAGTAACACCTCAACTCGTAGTCTTAGGAGGAATTTGGGTCCCACCCCCAACAGGCACCACTAACGCGCTCTTTAGCTCTCACCCAGTCCCTCACGAGCCGCCACAACCTTACTTCCCTTCCGCCGCTCCGCCGCATGACTCGTACACCATCACAACACTGCAATCACACAATCACACCTTCCACCACCACTACCATCACCACAATCTCAACGGTACAAAACGACGTCGCAGAGCCTGA 1332 0.4685 MAAVPSELSLDCKLHHSFSMLLMKSFPDHHTDQTHHNRKLEEFVSRLQEERLKIDAFKRELPLCMQLLTNAMEESRQKLEALRGNEDKKSAVLEDFIPLRNSNSESSEKASSTCDKANWMISAQLWSQANEETKPQYSTIASPNHKGQSVHDQIAGLTFNVSPNKLHKNISGGAFLPFSNERISSNQCPSSTPLQALPELALTTSPDGKQIMEDEKLYSQTENSSKGGRSSNNGGVVSDQRKRIITVLCEVKTTSKTASTTSTTQSHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQVLSSLSPHMRVWGLKKGVHHFCCPKLMLKYRLHTRRPGQQSQAGGAVTPQLVVLGGIWVPPPTGTTNALFSSHPVPHEPPQPYFPSAAPPHDSYTITTLQSHNHTFHHHYHHHNLNGTKRRRRA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1894 443 Coils Coil 65 85 - -
Prci4g1894 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 266 326 IPR017930 -
Prci4g1894 443 MobiDBLite consensus disorder prediction 218 237 - -
Prci4g1894 443 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 22 397 IPR044787 GO:0003700|GO:0006355
Prci4g1894 443 SUPERFAMILY Homeodomain-like 267 320 IPR009057 -
Prci4g1894 443 MobiDBLite consensus disorder prediction 221 237 - -
Prci4g1894 443 NCBIfam myb-like DNA-binding domain, SHAQKYF class 269 321 IPR006447 GO:0003677
Prci4g1894 443 Gene3D - 268 323 - -
Prci4g1894 443 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1894 Prci-Chr4 25811975 25814843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1894 3 380 G2-like Transcription Factor Family AT2G03500 47.436 4.78e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci4g1894 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1894 4 25811975 25814843 Prci9g1353 9 27050811 27053566 CCT
Prci4g1894 4 25811975 25814843 Prci4g1894 4 25811975 25814843 ECH