Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1329 ATGGAACCAACAAAAGCCCTAATGGCTTCCTTCCTCCTTCTGTTTTTCTTCTTCAATATCCATCCTTCTGCTCAGAATCCGCCGCCTTCCACCGTCTCCGGCCACCGCCATCACCAAGCATTGCGCAGACTCCAAGCTCTCAAAGCTTCTCACGTCAGATTCAGCGCCTCCGGTGCTTCATCACCGTCTCCTTCTCCGTCACCTTCACGGCCACCACCGTCGGGTTCGAGCGGTTCACGGGTATACCTTGCGACGTCGTACGGGGCGGATCCGACGGGGAAGTTGGATAGTACAGAAGCTCTTCTTGCGGCGATAGCGGATGCGGCTAATGGTCACGGTGAAGGGTTCTTGATGGACGGCATTTCTAATCTTGGAGGAGCACAGCTTGATCTTCAGGGCGGCAATTACTTGATCAGCCGGCCACTCCGGCTGCCAGTCGCTGGCGTCGGAAACTTCATGATTCACGGTGGGACGATACGAGCCTCAGATAGCTTTCCATCAGGTGGGTACCTCATTGATTTATCAACCAACATAAATGACAAGACTGCCCCTCCTTCATCCTACAATTACGAGTTCCTCACCTTCAAGGACCTCCTCTTGGATTCAAACTTCCATGGCGGAGGCATCTTCGTCATCAACTCTCTCAGAATCGGTATCGACAACTGCTACGTCACTCATTTCACCACCAACGGAATCCTCGTCCAGGGCGGCCACGAAACTTACATCAGAAACTCCTTCATCGGACAGCACATCACAGCCGGCGGCGACAAAGGGGAGAGGAACTTCACCGGCATCGGAATCAACCTCCAGGGGAACGACAACTCCGTCACCGACGTCGTCATCTTCTCCGCCGCCATAGGAATCATGATCTTTGGCCAGGCCAACATAATCTCCGGCGTACATTGCTATAACAAAGCCACCGGCTTCGGAGGCACCGGGATTTATCTGAAACTCGCCGGGTTGACGCAAACTAGGGTTTTGAACTCCTACATGGATTACACCAGTATTGTTGCAGAAGACCCAGTTCAGCTTCATATTTCTGGTACTTTCTTCCTCGGAGATGCCAACGTTGTGCTCAAATCAATCAACGGAGTTGTCAGTGGAGTGAATATCGTTGACAACATGTTTTCTGGGTCTGACCACGGGGTTGAGATTGTTCATCTGGATCAATCGGGTGGTAAAAATTTTAAGCAAGTCGATCAGGTTGTGGTGGACAGCAACGTTGTGGAGGGGATGAAGTTGAAGAGTACTGTGGCAAAGAAGGCTGTGCAAGGGAATGGGACTTCATTAATGGCGGATTTCAATGATGTTTTGCTTTTTCCGAACCTTATCAAACATGTCCAGTATTCTTTGAGCTTCGACGGCGACACTTTTCCGAGCCATGTTCTGAGGAACGTGTCTGATAATCGTGTCGTGATTCAAACAAGTGAAGCAGTGCCTGCTAGTTTATATGTCGCAGTGGATCAAGGTATATAA 1476 0.5047 MEPTKALMASFLLLFFFFNIHPSAQNPPPSTVSGHRHHQALRRLQALKASHVRFSASGASSPSPSPSPSRPPPSGSSGSRVYLATSYGADPTGKLDSTEALLAAIADAANGHGEGFLMDGISNLGGAQLDLQGGNYLISRPLRLPVAGVGNFMIHGGTIRASDSFPSGGYLIDLSTNINDKTAPPSSYNYEFLTFKDLLLDSNFHGGGIFVINSLRIGIDNCYVTHFTTNGILVQGGHETYIRNSFIGQHITAGGDKGERNFTGIGINLQGNDNSVTDVVIFSAAIGIMIFGQANIISGVHCYNKATGFGGTGIYLKLAGLTQTRVLNSYMDYTSIVAEDPVQLHISGTFFLGDANVVLKSINGVVSGVNIVDNMFSGSDHGVEIVHLDQSGGKNFKQVDQVVVDSNVVEGMKLKSTVAKKAVQGNGTSLMADFNDVLLFPNLIKHVQYSLSFDGDTFPSHVLRNVSDNRVVIQTSEAVPASLYVAVDQGI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1329 491 Gene3D - 84 481 IPR012334 -
Prci3g1329 491 FunFam Polygalacturonase QRT3 84 484 - -
Prci3g1329 491 SUPERFAMILY Pectin lyase-like 80 447 IPR011050 -
Prci3g1329 491 PANTHER POLYGALACTURONASE QRT3 16 489 IPR039279 GO:0004650
Prci3g1329 491 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1329 Prci-Chr3 21516432 21519823 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1329 3 21516432 21519823 Prci3g1329 3 21516432 21519823 ECH