Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1204 ATGGCCGATGTGAAGAACGGCCAGGATAATCATCAGGGGATAAAGCTGTTTGGGGCTACGATCACGTTGCATCGGGGGAGACAGGTGGATCAGAAGGTGAAGGAGGAGGAGGAGGATCGAACGACGCCGGAGAAGAGGCCGGACAAGATCATACCTTGTCCGAGATGTAACAGCATGGACACCAAGTTTTGTTACTTCAACAATTACAACGTTAATCAGCCCAGGCATTTCTGTAAGGGCTGTCAGAGGTACTGGACTGCCGGCGGCGCCCTCCGGAACGTGCCCGTCGGAGCCGGCAGGAGGAAGGCAAAGCTTCCTTACCGTGAGGCTGCTGGCTTCTCGGAGGGGTATAGCTACGAGGCATCCGTCGACGGCGATCACCGACGGTTTGGTTTGGATGAGGGGTTGAAAATTGTGGAGGAGTGGCACGTTGCGATGGCTCAGAGTGGTTTCCGGCACCTTTTGCCGGCAAAACGGCAGAGGAACGACATAGCCGGTCAACCTTTTTAA 510 0.5529 MADVKNGQDNHQGIKLFGATITLHRGRQVDQKVKEEEEDRTTPEKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKLPYREAAGFSEGYSYEASVDGDHRRFGLDEGLKIVEEWHVAMAQSGFRHLLPAKRQRNDIAGQPF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1204 169 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Prci3g1204 169 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Prci3g1204 169 PANTHER CYCLIC DOF FACTOR 2 34 108 IPR045174 GO:0003700|GO:0006355
Prci3g1204 169 Pfam Dof domain, zinc finger 49 104 IPR003851 GO:0003677|GO:0006355
Prci3g1204 169 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1204 Prci-Chr3 15499053 15499949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1204 10 167 C2C2-Dof Transcription Factor Family AT1G29160 54.237 7.54e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci3g1204 zf-Dof 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1204 - - qsa:O6P43_012767 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1204 3 15499053 15499949 Prci3g1204 3 15499053 15499949 ECH