Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1042 ATGTTGGGTAACTGTGAGAAAATGGTGGTCATCCCCGCAACGAATAACGAATGGCCACAGACAGGTGATCAAAAGATCTCGATGGGTTCTGCTGGGAGGACGACAATGGAGAAACCTTCAGGTCAGGAGCTTCAGCAGCAGCAACAGTCTCTCAAGTGTCCTCGTTGTGATTCAATCAACACTAAGTTCTGCTACTACAACAACTATAGCTTGTCTCAGCCAAGGCACTTCTGCAAATCTTGCAAGCGATATTGGACCAGAGGAGGCACTCTGAGAAATGTTCCTGTAGGAGGTGGGTGCAGGAAAAACAAGCGAATGAAGCGCCCAGCACCTTCTGCTTCTGATCACACTCCTTCTTCTTCTTCTTCTCCTCCTAGTGCTGCTAATTCAAACCTTCCTTCTCAACCCCACGTCGATAGCCATGTCAATCCTCTGTTTTATGGGTTACCCGGTAACTCGAATTCTGACATGAATCCTCCATTTTCAAGTTTCAATTCTGGGTATGATCATCTTCAACCTCGTCTGAATGGCCTGGGATTGGGTTTTTGCTCTGGGTACGCTTCAAGCGATTCACTTTTCTCGAATTACAACTCCATCTTTGGTAATTCGATCTTCGGTAGTTCTCCTTCAACTTCCATAGCTTCCCTCCTAAGCCCCAGTACTAACCTGCAGCAACAGAAGTTCATCAATGGAGGTGTGAAGGATAATGTTCAAGGAACTAGCACTTTCCAGGGCTTAGAACCACTAGAAAAATTGAAAGTCGATGAAGAAAGACCCAACCAGATCATGGAGCATGGGAGCTTGTTCGATTACTATTCACCCTATTATTGGAACGATCAAACTAATAATGTTGGTCCTTCAGTCACTTCTCTGATCGAGTAA 882 0.4524 MLGNCEKMVVIPATNNEWPQTGDQKISMGSAGRTTMEKPSGQELQQQQQSLKCPRCDSINTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRMKRPAPSASDHTPSSSSSPPSAANSNLPSQPHVDSHVNPLFYGLPGNSNSDMNPPFSSFNSGYDHLQPRLNGLGLGFCSGYASSDSLFSNYNSIFGNSIFGSSPSTSIASLLSPSTNLQQQKFINGGVKDNVQGTSTFQGLEPLEKLKVDEERPNQIMEHGSLFDYYSPYYWNDQTNNVGPSVTSLIE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1042 293 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Prci3g1042 293 MobiDBLite consensus disorder prediction 113 136 - -
Prci3g1042 293 MobiDBLite consensus disorder prediction 95 136 - -
Prci3g1042 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 208 IPR045174 GO:0003700|GO:0006355
Prci3g1042 293 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Prci3g1042 293 MobiDBLite consensus disorder prediction 16 46 - -
Prci3g1042 293 Pfam Dof domain, zinc finger 49 105 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1042 Prci-Chr3 13348238 13350275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1042 23 109 C2C2-Dof Transcription Factor Family AT5G65590 66.667 2.37e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci3g1042 zf-Dof 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1042 - - pcin:129304804 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1042 3 13348238 13350275 Prci3g1042 3 13348238 13350275 ECH
Prci3g1042 3 13348238 13350275 Prci3g1042 3 13348238 13350275 PCT